Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497468

Identifier: 34497468

GI number: 34497468

Start: 2193653

End: 2196067

Strand: Reverse

Name: 34497468

Synonym: CV_2013

Alternate gene names: NA

Gene position: 2196067-2193653 (Counterclockwise)

Preceding gene: 34497469

Following gene: 34497467

Centisome position: 46.22

GC content: 68.41

Gene sequence:

>2415_bases
ATGTGGTCGACTGCTGCAGTTCAAGGCGGGAAGCTCCCGTTTCCTCAACCGTTGTTTGATTACTGGCTGGACGCCTGCCA
GCGCGGCGTCCTGTACTGGGATACGCTGTACCGGCGCGGCGCCACCTATCTGGAGCACTGCGAGAGCGGCAAGCCGCCGG
TGCTGGTCTTCGACTACCGTATCATCATGGACGGCAGGGAACTCCCCGACCCGGCCAACTACGCGCTGGCGGCCATCGTG
CCGCCCGCAGCCTGCCCGCCCACCGATCCCGCCAAGCGCCCCTTCGTCGTCATCGACCCCCGCGCCGGCCACGGCCCCGG
CATCGGCGGCTTCAAGATGGACAGCGAGATCGGCATCGCGCTGCAGCAAGGCCACCCCTGCTATTTCGTGATGTTCTTCC
CGCAGCCGGTGCCTGGCCAGACCATAGAAAGCGTGGCCAAGGCCGAGGGGCATTTCCTCAAGCGCGTCAACGAGCTGCAT
CCGGACAGCGACGGCAAGCCTTTCGTGATCGGCAACTGCCAGGGCGGCTGGGCGCTGGCCATGCTCGCGTCCGTCGCGCC
GGAACTGGTCGGCCCCATCCTGCTGGCCGGATCGCCGCTGTCCTACTGGGCCGGCGTGCGCGGCAAGAATCCGATGCGCT
ACGCCGGCGGACTGACCGGCGGCACCTGGACCGCCTCGCTGGCCGGCGACCTGGGCAACGGCCATTTCGACGGCGCCCAC
CTAGTGGAGAATTTCGAAAAGCTGGACCCGGCCAACACGCTGTGGAAGAAGTCCTACAATCTGTACGCCAAGGTGGACAC
CGAACCGCAGCGCTACCTGGATTTCGAGCGCTGGTGGGGCGGCCATTACCTGCTGAACAAGGCGGAAATGGAGTGGATCG
CCCAGAAGCTGTTCGTCGGCAACGAGCTGGTGCACGGCAAGATCACCAGCCACGACGGCAAGGTGCGGGTAGACATGCGC
AACATCCGCTCGCCCATCATGGTGTTCGCCTCCTGGGGCGACAACATCACGCCGCCGCAGCAGGCGCTGAACTGGATCGC
CGACCTCTACGACAACGTCGAGGACATCCGCAACAACGAGCAGACCATCGTCTACTGCCTGCACAACAAGGTCGGCCACC
TGGGCATCTTCGTGTCCGCCGGCGTGGCCAACAAGGAACACAGCGAATTCGCCAGCGCGCTGGACCTGGTCGACGTGCTG
GCGCCCGGCCTGTACGAGGCCATCATCGAGGATATCGCGCCGGACGCGCCCGGCCAGGAATACATCGAGGGGCGCTACAT
CATCCGCTTCGAGGCCCGCGACGTGTCCGACATCCTGGCGCTGGACGACGGCCGCGACGACGAGCGCGCGTTCGAGGTGG
TGAAGCGGGTGTCGGAGATCAATCAGGGCGTCTACGACCGCTACGTCTCGCCGGCGCTGCGCGCCGCCGGCACCGAGGCT
GGCGCCCGCCTGCTGCGGGAGTTGCACCCCGCCCGCTTCGAGCGCACGCTGATCTCGCCAAGAAATCCCTGGCTGTGGTG
GCTGCCCGGCCTCGCCGCCAAGGTGCGCGAACAGCGTCGCCCCGTGTCCCAGGACAACCCGCTGTGGCAGTGGCAGGAAC
AGGTGTCGGACTTCATCGTCCAGTCGCTGGACCATTACCGCGACCTGCGCGACGCCGCTCAGGAGCAACTGTTCCGCTCG
ATCTACGAATCGCCGCAGCTGGCCACGCTGGTCGGCGTGGCCCCCGCCGGCGAGCCGCGCAGCCAGGCCCTGGCCTGGGA
AACCCGCGAGCTCGCCCGCCTGAAGCGCGAGGCGCTGGATCCCAGCTTCGAACAGGGCACGCTGGCAGACGGCTTCGTGC
GGCTGCTGCTCTACGTCAGCATCGGCATCGGCGTGGTGGACGAGCGGCCATTCAACGCCATTCGCCGAGTGATGCGCGAC
GTGCGCCACGAATACCCGCTGACGCTGATGCAGTTGAAGGACATCGTCCGCCACCAGGTGGCGCTGGTGCGGCTGGACGC
CCCGCGCGCGCTGCGCGGACTCGCCCGGCTGCTGCCCGACCCGCACCGCCGCCACCAGGCCTGGCTGCTGGCGCGCGACC
TGCTGGTGCTGAACGGCCCGATCCCGGCCGAACACCAGGCGCGGCTGGACGAAGCGGCCAGGGTGTTGGCGCTGGATGCA
GACGCGGCCGCCCGGTCGGTCCTCCCTGCGGCGCAGCCTGAGCCTAAAGCGCCTGCCGACAAGCCGACAGGCGCGGCCAA
GACGCCGCGCAAAGCCGCCAAGCCTTCGGCCTCGAAATCGCCGGCGGCCGAAGCCAAACCAGTTGCCAAGACCGCCGCCT
CGACCCGCGCGCGCCAGCCCGCGGCCAAGGCCAACGGCCAGGCGCCGGGCAGCGCGCCGGCCGTCGCGGCGCCTGGCAAA
CGAGGCAAGACGTAA

Upstream 100 bases:

>100_bases
TTTATTGCATCGCAGCAAATAACGAGTACAGTGACGGCCATGGCTCTCAACGGGCCGTCGCATCGCGTCTTTTCCTACCG
TTCAAGAACAAGGGGTTGCA

Downstream 100 bases:

>100_bases
GCCATGCGCGGGAGCCGGGGTGGCTCGGTTCCCGCATTGACTATTGCAATAGCGAAAGCTAATATTCCGGTTCTGCGGGA
GAGAGGGGCCACGCCCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 804; Mature: 804

Protein sequence:

>804_residues
MWSTAAVQGGKLPFPQPLFDYWLDACQRGVLYWDTLYRRGATYLEHCESGKPPVLVFDYRIIMDGRELPDPANYALAAIV
PPAACPPTDPAKRPFVVIDPRAGHGPGIGGFKMDSEIGIALQQGHPCYFVMFFPQPVPGQTIESVAKAEGHFLKRVNELH
PDSDGKPFVIGNCQGGWALAMLASVAPELVGPILLAGSPLSYWAGVRGKNPMRYAGGLTGGTWTASLAGDLGNGHFDGAH
LVENFEKLDPANTLWKKSYNLYAKVDTEPQRYLDFERWWGGHYLLNKAEMEWIAQKLFVGNELVHGKITSHDGKVRVDMR
NIRSPIMVFASWGDNITPPQQALNWIADLYDNVEDIRNNEQTIVYCLHNKVGHLGIFVSAGVANKEHSEFASALDLVDVL
APGLYEAIIEDIAPDAPGQEYIEGRYIIRFEARDVSDILALDDGRDDERAFEVVKRVSEINQGVYDRYVSPALRAAGTEA
GARLLRELHPARFERTLISPRNPWLWWLPGLAAKVREQRRPVSQDNPLWQWQEQVSDFIVQSLDHYRDLRDAAQEQLFRS
IYESPQLATLVGVAPAGEPRSQALAWETRELARLKREALDPSFEQGTLADGFVRLLLYVSIGIGVVDERPFNAIRRVMRD
VRHEYPLTLMQLKDIVRHQVALVRLDAPRALRGLARLLPDPHRRHQAWLLARDLLVLNGPIPAEHQARLDEAARVLALDA
DAAARSVLPAAQPEPKAPADKPTGAAKTPRKAAKPSASKSPAAEAKPVAKTAASTRARQPAAKANGQAPGSAPAVAAPGK
RGKT

Sequences:

>Translated_804_residues
MWSTAAVQGGKLPFPQPLFDYWLDACQRGVLYWDTLYRRGATYLEHCESGKPPVLVFDYRIIMDGRELPDPANYALAAIV
PPAACPPTDPAKRPFVVIDPRAGHGPGIGGFKMDSEIGIALQQGHPCYFVMFFPQPVPGQTIESVAKAEGHFLKRVNELH
PDSDGKPFVIGNCQGGWALAMLASVAPELVGPILLAGSPLSYWAGVRGKNPMRYAGGLTGGTWTASLAGDLGNGHFDGAH
LVENFEKLDPANTLWKKSYNLYAKVDTEPQRYLDFERWWGGHYLLNKAEMEWIAQKLFVGNELVHGKITSHDGKVRVDMR
NIRSPIMVFASWGDNITPPQQALNWIADLYDNVEDIRNNEQTIVYCLHNKVGHLGIFVSAGVANKEHSEFASALDLVDVL
APGLYEAIIEDIAPDAPGQEYIEGRYIIRFEARDVSDILALDDGRDDERAFEVVKRVSEINQGVYDRYVSPALRAAGTEA
GARLLRELHPARFERTLISPRNPWLWWLPGLAAKVREQRRPVSQDNPLWQWQEQVSDFIVQSLDHYRDLRDAAQEQLFRS
IYESPQLATLVGVAPAGEPRSQALAWETRELARLKREALDPSFEQGTLADGFVRLLLYVSIGIGVVDERPFNAIRRVMRD
VRHEYPLTLMQLKDIVRHQVALVRLDAPRALRGLARLLPDPHRRHQAWLLARDLLVLNGPIPAEHQARLDEAARVLALDA
DAAARSVLPAAQPEPKAPADKPTGAAKTPRKAAKPSASKSPAAEAKPVAKTAASTRARQPAAKANGQAPGSAPAVAAPGK
RGKT
>Mature_804_residues
MWSTAAVQGGKLPFPQPLFDYWLDACQRGVLYWDTLYRRGATYLEHCESGKPPVLVFDYRIIMDGRELPDPANYALAAIV
PPAACPPTDPAKRPFVVIDPRAGHGPGIGGFKMDSEIGIALQQGHPCYFVMFFPQPVPGQTIESVAKAEGHFLKRVNELH
PDSDGKPFVIGNCQGGWALAMLASVAPELVGPILLAGSPLSYWAGVRGKNPMRYAGGLTGGTWTASLAGDLGNGHFDGAH
LVENFEKLDPANTLWKKSYNLYAKVDTEPQRYLDFERWWGGHYLLNKAEMEWIAQKLFVGNELVHGKITSHDGKVRVDMR
NIRSPIMVFASWGDNITPPQQALNWIADLYDNVEDIRNNEQTIVYCLHNKVGHLGIFVSAGVANKEHSEFASALDLVDVL
APGLYEAIIEDIAPDAPGQEYIEGRYIIRFEARDVSDILALDDGRDDERAFEVVKRVSEINQGVYDRYVSPALRAAGTEA
GARLLRELHPARFERTLISPRNPWLWWLPGLAAKVREQRRPVSQDNPLWQWQEQVSDFIVQSLDHYRDLRDAAQEQLFRS
IYESPQLATLVGVAPAGEPRSQALAWETRELARLKREALDPSFEQGTLADGFVRLLLYVSIGIGVVDERPFNAIRRVMRD
VRHEYPLTLMQLKDIVRHQVALVRLDAPRALRGLARLLPDPHRRHQAWLLARDLLVLNGPIPAEHQARLDEAARVLALDA
DAAARSVLPAAQPEPKAPADKPTGAAKTPRKAAKPSASKSPAAEAKPVAKTAASTRARQPAAKANGQAPGSAPAVAAPGK
RGKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88817; Mature: 88817

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSTAAVQGGKLPFPQPLFDYWLDACQRGVLYWDTLYRRGATYLEHCESGKPPVLVFDYR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCEEEEEEE
IIMDGRELPDPANYALAAIVPPAACPPTDPAKRPFVVIDPRAGHGPGIGGFKMDSEIGIA
EEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCEE
LQQGHPCYFVMFFPQPVPGQTIESVAKAEGHFLKRVNELHPDSDGKPFVIGNCQGGWALA
EECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
MLASVAPELVGPILLAGSPLSYWAGVRGKNPMRYAGGLTGGTWTASLAGDLGNGHFDGAH
HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCCHHH
LVENFEKLDPANTLWKKSYNLYAKVDTEPQRYLDFERWWGGHYLLNKAEMEWIAQKLFVG
HHHHHHHCCCHHHHHHHCCCEEEEECCCHHHHHCHHHHCCCHHEECHHHHHHHHHHHHHC
NELVHGKITSHDGKVRVDMRNIRSPIMVFASWGDNITPPQQALNWIADLYDNVEDIRNNE
CCEEECEEECCCCEEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
QTIVYCLHNKVGHLGIFVSAGVANKEHSEFASALDLVDVLAPGLYEAIIEDIAPDAPGQE
CEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
YIEGRYIIRFEARDVSDILALDDGRDDERAFEVVKRVSEINQGVYDRYVSPALRAAGTEA
HHCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
GARLLRELHPARFERTLISPRNPWLWWLPGLAAKVREQRRPVSQDNPLWQWQEQVSDFIV
HHHHHHHHCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
QSLDHYRDLRDAAQEQLFRSIYESPQLATLVGVAPAGEPRSQALAWETRELARLKREALD
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PSFEQGTLADGFVRLLLYVSIGIGVVDERPFNAIRRVMRDVRHEYPLTLMQLKDIVRHQV
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALVRLDAPRALRGLARLLPDPHRRHQAWLLARDLLVLNGPIPAEHQARLDEAARVLALDA
HEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHEEEECC
DAAARSVLPAAQPEPKAPADKPTGAAKTPRKAAKPSASKSPAAEAKPVAKTAASTRARQP
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
AAKANGQAPGSAPAVAAPGKRGKT
HHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWSTAAVQGGKLPFPQPLFDYWLDACQRGVLYWDTLYRRGATYLEHCESGKPPVLVFDYR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCEEEEEEE
IIMDGRELPDPANYALAAIVPPAACPPTDPAKRPFVVIDPRAGHGPGIGGFKMDSEIGIA
EEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCEE
LQQGHPCYFVMFFPQPVPGQTIESVAKAEGHFLKRVNELHPDSDGKPFVIGNCQGGWALA
EECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
MLASVAPELVGPILLAGSPLSYWAGVRGKNPMRYAGGLTGGTWTASLAGDLGNGHFDGAH
HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCCHHH
LVENFEKLDPANTLWKKSYNLYAKVDTEPQRYLDFERWWGGHYLLNKAEMEWIAQKLFVG
HHHHHHHCCCHHHHHHHCCCEEEEECCCHHHHHCHHHHCCCHHEECHHHHHHHHHHHHHC
NELVHGKITSHDGKVRVDMRNIRSPIMVFASWGDNITPPQQALNWIADLYDNVEDIRNNE
CCEEECEEECCCCEEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
QTIVYCLHNKVGHLGIFVSAGVANKEHSEFASALDLVDVLAPGLYEAIIEDIAPDAPGQE
CEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
YIEGRYIIRFEARDVSDILALDDGRDDERAFEVVKRVSEINQGVYDRYVSPALRAAGTEA
HHCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
GARLLRELHPARFERTLISPRNPWLWWLPGLAAKVREQRRPVSQDNPLWQWQEQVSDFIV
HHHHHHHHCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
QSLDHYRDLRDAAQEQLFRSIYESPQLATLVGVAPAGEPRSQALAWETRELARLKREALD
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PSFEQGTLADGFVRLLLYVSIGIGVVDERPFNAIRRVMRDVRHEYPLTLMQLKDIVRHQV
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALVRLDAPRALRGLARLLPDPHRRHQAWLLARDLLVLNGPIPAEHQARLDEAARVLALDA
HEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHEEEECC
DAAARSVLPAAQPEPKAPADKPTGAAKTPRKAAKPSASKSPAAEAKPVAKTAASTRARQP
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
AAKANGQAPGSAPAVAAPGKRGKT
HHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10094701 [H]