| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ccrB
Identifier: 34497395
GI number: 34497395
Start: 2111455
End: 2111835
Strand: Reverse
Name: ccrB
Synonym: CV_1940
Alternate gene names: 34497395
Gene position: 2111835-2111455 (Counterclockwise)
Preceding gene: 34497397
Following gene: 34497394
Centisome position: 44.45
GC content: 68.24
Gene sequence:
>381_bases ATGTGGAAATCCATACTCGCCATCGCCATAGGCGCCGCCGCCGGCGCGCTGCTGCGCTGGTTCCTGGGCCTGCGCCTGAA CAGCCTGTTCCCTTCCCTGCCCCCCGGCACGCTGGCCGCCAACCTGGTCGGCGGCTACATCATCGGCGTGGCCGTGGCGC TGTTCGCCGACATGCCGATGCTGTCGCCGCTGTGGCGGCTGCTGATCATCACCGGCTTCTGCGGCGGCCTCACCACCTTT TCGACATTCTCCGCCGAGGTGGTGGACCTGCTGCGCCAGGGTCAGCTGCAACCGGCCTTCGCCGCCATCGCCGTGCATGT CAGCGGCTCGCTGCTGATGACCATGGCCGGCATCGCCAGCTGGCAGTGGCTGAGACGCTGA
Upstream 100 bases:
>100_bases CCCCTGGGGCTCTTTTTTTATTCCCTCCAGCCAGGCCGCGCTAGGCGAATCCGCGATGCCGATGCACAATGGCCATCATC CATCGACACCTTTCGCCGCC
Downstream 100 bases:
>100_bases TCCCCCGAGCGAATCTCGCTGCGGCAAACGCCCGCCGGCGCGCCAAACCGCCGGCACTACGTATTCGGCACCATATCGAA CAGACTGTCCGCTACCTATG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MWKSILAIAIGAAAGALLRWFLGLRLNSLFPSLPPGTLAANLVGGYIIGVAVALFADMPMLSPLWRLLIITGFCGGLTTF STFSAEVVDLLRQGQLQPAFAAIAVHVSGSLLMTMAGIASWQWLRR
Sequences:
>Translated_126_residues MWKSILAIAIGAAAGALLRWFLGLRLNSLFPSLPPGTLAANLVGGYIIGVAVALFADMPMLSPLWRLLIITGFCGGLTTF STFSAEVVDLLRQGQLQPAFAAIAVHVSGSLLMTMAGIASWQWLRR >Mature_126_residues MWKSILAIAIGAAAGALLRWFLGLRLNSLFPSLPPGTLAANLVGGYIIGVAVALFADMPMLSPLWRLLIITGFCGGLTTF STFSAEVVDLLRQGQLQPAFAAIAVHVSGSLLMTMAGIASWQWLRR
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=114, Percent_Identity=50, Blast_Score=112, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_CHRVO (Q7NWP1)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901610.1 - GeneID: 2549049 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1940 - NMPDR: fig|243365.1.peg.1940 - HOGENOM: HBG753179 - OMA: IASHPEW - PhylomeDB: Q7NWP1 - ProtClustDB: PRK14196 - BioCyc: CVIO243365:CV_1940-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13400; Mature: 13400
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xddf3114)-; HASH(0xfffd510)-; HASH(0xf8d1cb4)-; HASH(0xd2ee7ec)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKSILAIAIGAAAGALLRWFLGLRLNSLFPSLPPGTLAANLVGGYIIGVAVALFADMPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH LSPLWRLLIITGFCGGLTTFSTFSAEVVDLLRQGQLQPAFAAIAVHVSGSLLMTMAGIAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH WQWLRR HHHHCH >Mature Secondary Structure MWKSILAIAIGAAAGALLRWFLGLRLNSLFPSLPPGTLAANLVGGYIIGVAVALFADMPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH LSPLWRLLIITGFCGGLTTFSTFSAEVVDLLRQGQLQPAFAAIAVHVSGSLLMTMAGIAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH WQWLRR HHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14500782