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The map label for this gene is bphR [H]

Identifier: 34497377

GI number: 34497377

Start: 2092322

End: 2092996

Strand: Reverse

Name: bphR [H]

Synonym: CV_1922

Alternate gene names: 34497377

Gene position: 2092996-2092322 (Counterclockwise)

Preceding gene: 34497378

Following gene: 34497375

Centisome position: 44.05

GC content: 65.63

Gene sequence:

>675_bases
ATGACCACCCTGCAGCCGATCAAGCGCCAGACGCTTACCAGTGCCGTCACCGAGTCCCTGCGCCGTCGCATCCTGTCCGG
CGAGTTCGCCGACGGCCAACAACTGCGCCAAGAGGCGCTGTCCAATGAATACGGCGTCAGCCGGGTGCCAGTGCGGGAAG
CGCTGCGGCAGCTGGAAGCCGAGGGCCTGATCCAGATCATCGACCACAAGGGCGCCCTGGTGTCCAAGCTGTCGCTGGAA
GACATCCTGGAATTGCTGGAAGTGCGGGCGATGCTGGAATGCTCGCTGCTGAAGGCGGCCATTCCCTGTCAGAGCTCGGC
CGACCACGAAGCCGCCCAGCAGACGCTGCGGGAATTCGAGGTCGCGCTCAACAACAACGACGTGCGCCACTGGGGCGAGA
TCAACTCCCGCTTCCACCTGGCGCTGTACCGCGCCGCCCGCCGGCCAAACACGCTGGCGCTGATCGAGCAGCTGCACAAC
AAGACCGACCGCTACACCCGGATGCAGATCCTGTTCACCCGCACCATGGAGCGCGCCCACGAGGAGCACACCCGGCTGCT
GGAGCTGTGCCGCCAGGGCAAGGCGGACGAAGCGGCGGAATTCCTGCGCTTCCACATCCTGTCGGCCGGCCACGCGCTGG
AAAGCTACCTGAAGGGCCAGCAGGCCAATCACTGA

Upstream 100 bases:

>100_bases
GCCAGCTGCCTATGCCGAATCACTTGCAGAGAAATCAGGTCAATTAAGCCCGGACTCTAAAGCTCTCTGCTACTGAAAGT
GGGGGGACGTCGCATCCACC

Downstream 100 bases:

>100_bases
GCGCAGCCGCTGCGCCAGTCGGCGGCCGCCCGCCTCAAGGCGTCCGCCAGATACAGGCAGGCGGGTCCGGCGGACGACGG
TTCCGCCAGCACCAGGTACA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTTLQPIKRQTLTSAVTESLRRRILSGEFADGQQLRQEALSNEYGVSRVPVREALRQLEAEGLIQIIDHKGALVSKLSLE
DILELLEVRAMLECSLLKAAIPCQSSADHEAAQQTLREFEVALNNNDVRHWGEINSRFHLALYRAARRPNTLALIEQLHN
KTDRYTRMQILFTRTMERAHEEHTRLLELCRQGKADEAAEFLRFHILSAGHALESYLKGQQANH

Sequences:

>Translated_224_residues
MTTLQPIKRQTLTSAVTESLRRRILSGEFADGQQLRQEALSNEYGVSRVPVREALRQLEAEGLIQIIDHKGALVSKLSLE
DILELLEVRAMLECSLLKAAIPCQSSADHEAAQQTLREFEVALNNNDVRHWGEINSRFHLALYRAARRPNTLALIEQLHN
KTDRYTRMQILFTRTMERAHEEHTRLLELCRQGKADEAAEFLRFHILSAGHALESYLKGQQANH
>Mature_223_residues
TTLQPIKRQTLTSAVTESLRRRILSGEFADGQQLRQEALSNEYGVSRVPVREALRQLEAEGLIQIIDHKGALVSKLSLED
ILELLEVRAMLECSLLKAAIPCQSSADHEAAQQTLREFEVALNNNDVRHWGEINSRFHLALYRAARRPNTLALIEQLHNK
TDRYTRMQILFTRTMERAHEEHTRLLELCRQGKADEAAEFLRFHILSAGHALESYLKGQQANH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=213, Percent_Identity=27.2300469483568, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787821, Length=167, Percent_Identity=28.7425149700599, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25615; Mature: 25483

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLQPIKRQTLTSAVTESLRRRILSGEFADGQQLRQEALSNEYGVSRVPVREALRQLEA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
EGLIQIIDHKGALVSKLSLEDILELLEVRAMLECSLLKAAIPCQSSADHEAAQQTLREFE
HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VALNNNDVRHWGEINSRFHLALYRAARRPNTLALIEQLHNKTDRYTRMQILFTRTMERAH
HHHCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEHTRLLELCRQGKADEAAEFLRFHILSAGHALESYLKGQQANH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTLQPIKRQTLTSAVTESLRRRILSGEFADGQQLRQEALSNEYGVSRVPVREALRQLEA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
EGLIQIIDHKGALVSKLSLEDILELLEVRAMLECSLLKAAIPCQSSADHEAAQQTLREFE
HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VALNNNDVRHWGEINSRFHLALYRAARRPNTLALIEQLHNKTDRYTRMQILFTRTMERAH
HHHCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEHTRLLELCRQGKADEAAEFLRFHILSAGHALESYLKGQQANH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]