| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is eamA [H]
Identifier: 34497359
GI number: 34497359
Start: 2068972
End: 2069874
Strand: Direct
Name: eamA [H]
Synonym: CV_1904
Alternate gene names: 34497359
Gene position: 2068972-2069874 (Clockwise)
Preceding gene: 34497358
Following gene: 34497360
Centisome position: 43.55
GC content: 70.65
Gene sequence:
>903_bases ATGCCGCTGGCTGACGTGGCGCAGGCGCTGGCCATCGTGCTGGTCTGGGGCGTGAACTTCGTGGTGATCAAATGGGGCGT GGCCGGCGTGCCGCCGCTGCTGCTGGGCGCGCTGCGTTTCGCGCTGGTGGCGCTGCCGGCGGTATTCGTCATCAGGCGGC CGGCCCTGCCGTGGCGCTACCTGGCGCTGTATGGGCTGACGGTGGGCGTGGGGCAGTTCGGCTGCCTGTTTTCCGCGATC AAGCTGGGCATGCCGGCCGGACTCGCCTCGGTGGTGCTGCAGTCGCAGGCCTTTTTCACGCTGCTGCTGGCTCGGGTGTT TCTAGGCGAGCGCTGGCAGGCCAGCCAGCTGGTTGGCCTGCTGCTGGCTTTGGGCGGCCTGGCGCTGATCGGCATGGGCA AGGGCGGCGACATGACCGCGGTCGGCTTCGGCCTGACCATCGCCGCGGCCACCAGCTGGGCAGCGTCCAATGTCGTGGTG CGCGCGATAGGCCGCGCCGGCTTCAAGGTGGAGCCGCTGGGCCTGGTGGTGTGGTCCAGCCTGGTGCCGCCGATTCCCTT CCTGCTGTTGTCGTGGCGGCTGGAAGGCGGCGAGCGCATGGCGGCGGCGCTGCGAGGCTTCGACGGGCAGTCGCTGTTCG CCGTCGCCTATCTGGCCTTTGTGGCCACCATGTTCGGCTATGGGCTGTGGAGCCGCCTGCTGGCGCGGCACGCCGCGGCC AAGGTGGCGCCGTTCTCGCTGCTGGTGCCGGTGGTGGGATTGCTGGCTTCGCACTGGCTGCTGAGCGAGACGCTGACGCC CGCTCAGTTGGCCGGCAGCGGCCTGCTGATGGCCGGCCTGCTGGCCACGGTGTTCGGCGGCAGGCTGTTGGCGGCGGCGG AGGGCAGGACTCGCCGTGCGTGA
Upstream 100 bases:
>100_bases GCGCTGGCGCAGGGCTATCGGCTGCATGGCTCGCCGGCGGCCACCTTCAACGGCGAGCGCGTGATCGTCGCGCAGGCGGT GCTGTGGCCGGGAGCGAACG
Downstream 100 bases:
>100_bases CGTCTATTTCCTGCTGTCGCCCTGCGTGCTGCTGCTGGACCTGGCCGGCCCGGCCGACGCTTTCAGGCTGGCAGGCCAGC ATGGCGCGGCGTTCCGGCTG
Product: DMT superfamily transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPLADVAQALAIVLVWGVNFVVIKWGVAGVPPLLLGALRFALVALPAVFVIRRPALPWRYLALYGLTVGVGQFGCLFSAI KLGMPAGLASVVLQSQAFFTLLLARVFLGERWQASQLVGLLLALGGLALIGMGKGGDMTAVGFGLTIAAATSWAASNVVV RAIGRAGFKVEPLGLVVWSSLVPPIPFLLLSWRLEGGERMAAALRGFDGQSLFAVAYLAFVATMFGYGLWSRLLARHAAA KVAPFSLLVPVVGLLASHWLLSETLTPAQLAGSGLLMAGLLATVFGGRLLAAAEGRTRRA
Sequences:
>Translated_300_residues MPLADVAQALAIVLVWGVNFVVIKWGVAGVPPLLLGALRFALVALPAVFVIRRPALPWRYLALYGLTVGVGQFGCLFSAI KLGMPAGLASVVLQSQAFFTLLLARVFLGERWQASQLVGLLLALGGLALIGMGKGGDMTAVGFGLTIAAATSWAASNVVV RAIGRAGFKVEPLGLVVWSSLVPPIPFLLLSWRLEGGERMAAALRGFDGQSLFAVAYLAFVATMFGYGLWSRLLARHAAA KVAPFSLLVPVVGLLASHWLLSETLTPAQLAGSGLLMAGLLATVFGGRLLAAAEGRTRRA >Mature_299_residues PLADVAQALAIVLVWGVNFVVIKWGVAGVPPLLLGALRFALVALPAVFVIRRPALPWRYLALYGLTVGVGQFGCLFSAIK LGMPAGLASVVLQSQAFFTLLLARVFLGERWQASQLVGLLLALGGLALIGMGKGGDMTAVGFGLTIAAATSWAASNVVVR AIGRAGFKVEPLGLVVWSSLVPPIPFLLLSWRLEGGERMAAALRGFDGQSLFAVAYLAFVATMFGYGLWSRLLARHAAAK VAPFSLLVPVVGLLASHWLLSETLTPAQLAGSGLLMAGLLATVFGGRLLAAAEGRTRRA
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=275, Percent_Identity=49.0909090909091, Blast_Score=233, Evalue=8e-63, Organism=Escherichia coli, GI87082351, Length=285, Percent_Identity=27.3684210526316, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31371; Mature: 31240
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLADVAQALAIVLVWGVNFVVIKWGVAGVPPLLLGALRFALVALPAVFVIRRPALPWRY CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LALYGLTVGVGQFGCLFSAIKLGMPAGLASVVLQSQAFFTLLLARVFLGERWQASQLVGL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLALGGLALIGMGKGGDMTAVGFGLTIAAATSWAASNVVVRAIGRAGFKVEPLGLVVWSS HHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHH LVPPIPFLLLSWRLEGGERMAAALRGFDGQSLFAVAYLAFVATMFGYGLWSRLLARHAAA HCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVAPFSLLVPVVGLLASHWLLSETLTPAQLAGSGLLMAGLLATVFGGRLLAAAEGRTRRA HHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCC >Mature Secondary Structure PLADVAQALAIVLVWGVNFVVIKWGVAGVPPLLLGALRFALVALPAVFVIRRPALPWRY CHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LALYGLTVGVGQFGCLFSAIKLGMPAGLASVVLQSQAFFTLLLARVFLGERWQASQLVGL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLALGGLALIGMGKGGDMTAVGFGLTIAAATSWAASNVVVRAIGRAGFKVEPLGLVVWSS HHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHH LVPPIPFLLLSWRLEGGERMAAALRGFDGQSLFAVAYLAFVATMFGYGLWSRLLARHAAA HCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVAPFSLLVPVVGLLASHWLLSETLTPAQLAGSGLLMAGLLATVFGGRLLAAAEGRTRRA HHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]