Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34497303

Identifier: 34497303

GI number: 34497303

Start: 2001833

End: 2002528

Strand: Direct

Name: 34497303

Synonym: CV_1848

Alternate gene names: NA

Gene position: 2001833-2002528 (Clockwise)

Preceding gene: 34497302

Following gene: 34497304

Centisome position: 42.13

GC content: 69.11

Gene sequence:

>696_bases
ATGCGCTATGCCGCCTATTACGCGCCCCGACCAGATTCCGCATTGTGGCGCGCCGGCTGCGAATGGCTGGGGTATGACGC
CGCCGGCGGCGCCCAGCTGCCGCGGCCCGACGTGGAGGGCGTCGAGGCCGGCGAGCTTGCCGGCCTCACCCGCGAAGCGG
CCCGCTACGGCTGGCATGCCACGCTGAAGGCGCCGTTCGCCTTGAGGCCCGGAGTCGGCGAGGATGCCCTGCTTCTTCAG
ACCAGCATGCTGGCGCGGAGGTTTCAGCCGTTCGCCTTGAGTCTGCAAGTGGGCTGGCTGGGCGATTTTCTGGCCTTGCG
GCCCGCCGGGCCCTGCGCCGAGCTGGATGAGCTGGCCGCCGCCTGCTCGGTGTCGCTGGAGGGCCTGGCGGATAGACATG
CGCCCTTGAGGCCGAGAGAGGGGCTGGATCCGCGGCAGCAAGCGCTGTATCGCCGCTGGGGCTATCCCTATGTGTTCGAG
CAATTTCGCTTCCATTTGACGCTTTCGGATCGCCTGGACCGGGAGTCGGCGGCCGCGGTCCTGATCGAGCGCGGCGCGCG
CCGCCATTTCGCCGGGCTGCTGCAGCAGGTGGCGGTGGCCGGCGTGACGCTGTTCGTCGAACGCGAGCAGGGCGGGCCGT
TCCGCTATCTGGCTTACTGCGGTTTCAATGGCGAGGTGGCGCGCCATGGCAGATAA

Upstream 100 bases:

>100_bases
ACGTGAAGTCGCTGAACGTCGACGGCGAGGGCCGGCCGGTGCAGTACGGCGTCACCTGCTTCAACGGCGACCTGGTGCAA
TTGGTGATGGAGCAGGAATG

Downstream 100 bases:

>100_bases
AACCGGCACGCTGTGGTATGTGATGGGCCCCTCCGGCGCCGGCAAGGACAGCCTGCTGGCGTATGCGCGGCAGCGGCTGC
CCGGCGGCGTGATGTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MRYAAYYAPRPDSALWRAGCEWLGYDAAGGAQLPRPDVEGVEAGELAGLTREAARYGWHATLKAPFALRPGVGEDALLLQ
TSMLARRFQPFALSLQVGWLGDFLALRPAGPCAELDELAAACSVSLEGLADRHAPLRPREGLDPRQQALYRRWGYPYVFE
QFRFHLTLSDRLDRESAAAVLIERGARRHFAGLLQQVAVAGVTLFVEREQGGPFRYLAYCGFNGEVARHGR

Sequences:

>Translated_231_residues
MRYAAYYAPRPDSALWRAGCEWLGYDAAGGAQLPRPDVEGVEAGELAGLTREAARYGWHATLKAPFALRPGVGEDALLLQ
TSMLARRFQPFALSLQVGWLGDFLALRPAGPCAELDELAAACSVSLEGLADRHAPLRPREGLDPRQQALYRRWGYPYVFE
QFRFHLTLSDRLDRESAAAVLIERGARRHFAGLLQQVAVAGVTLFVEREQGGPFRYLAYCGFNGEVARHGR
>Mature_231_residues
MRYAAYYAPRPDSALWRAGCEWLGYDAAGGAQLPRPDVEGVEAGELAGLTREAARYGWHATLKAPFALRPGVGEDALLLQ
TSMLARRFQPFALSLQVGWLGDFLALRPAGPCAELDELAAACSVSLEGLADRHAPLRPREGLDPRQQALYRRWGYPYVFE
QFRFHLTLSDRLDRESAAAVLIERGARRHFAGLLQQVAVAGVTLFVEREQGGPFRYLAYCGFNGEVARHGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25575; Mature: 25575

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYAAYYAPRPDSALWRAGCEWLGYDAAGGAQLPRPDVEGVEAGELAGLTREAARYGWHA
CCEEEECCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE
TLKAPFALRPGVGEDALLLQTSMLARRFQPFALSLQVGWLGDFLALRPAGPCAELDELAA
EEECCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHEECCCCCCHHHHHHHH
ACSVSLEGLADRHAPLRPREGLDPRQQALYRRWGYPYVFEQFRFHLTLSDRLDRESAAAV
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEHHHHCCHHHHHHH
LIERGARRHFAGLLQQVAVAGVTLFVEREQGGPFRYLAYCGFNGEVARHGR
HHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRYAAYYAPRPDSALWRAGCEWLGYDAAGGAQLPRPDVEGVEAGELAGLTREAARYGWHA
CCEEEECCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE
TLKAPFALRPGVGEDALLLQTSMLARRFQPFALSLQVGWLGDFLALRPAGPCAELDELAA
EEECCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHEECCCCCCHHHHHHHH
ACSVSLEGLADRHAPLRPREGLDPRQQALYRRWGYPYVFEQFRFHLTLSDRLDRESAAAV
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEHHHHCCHHHHHHH
LIERGARRHFAGLLQQVAVAGVTLFVEREQGGPFRYLAYCGFNGEVARHGR
HHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA