| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497293
Identifier: 34497293
GI number: 34497293
Start: 1994167
End: 1994838
Strand: Direct
Name: 34497293
Synonym: CV_1838
Alternate gene names: NA
Gene position: 1994167-1994838 (Clockwise)
Preceding gene: 34497291
Following gene: 34497302
Centisome position: 41.97
GC content: 66.22
Gene sequence:
>672_bases GTGAACGCTCAGAATCGGATATCCAGCCATGACGAGCTGCTGTCGCCGCGCCCGCTGCCGCTGGAAACCGGCATCCGCCG GCTGGACGACGGCCGCCTGCTGGTGGCGGTGAGAACCGAGCTGCCAGGCTGCGCCGGCAGGATGCTGGAGTGGTGGTTCA AATTTTTCGAGACCACCCAGCACATCCGCTGGTGGCATCCGCACGACCATCACCGGATGCATGGCTGGGATAAGCAATGG CGGCGAGGCGAGAGCTATGTCGGCGCTTGCGTGCGCGCGGAGGAGTCGCTGGGCGACTTTCCGCCGGTGACGGCGGCGCT GAAGTTTCACGAGCCGGCAGATTTTTTCTCGGCCGACGCGCTGGCGCAGGCAAGACGCCAGCAGGCGGTGTCCGGGCTGG TGTGCGCCCGGATCGCTTTCGGCGACGAGCCGCGCTTGGCGGCCGACGGCGATCCGCAGGATGGCGAAATGATCCACCTG GTGCGCGACAAGCCGCAAGGCGCGGTGCTGCGCAGCCGCTTTGTGCTGGGCGGGGAGTCGCCGGTGCCGAACGAGTTGGG TTTAGGGCTGATGCAGCATTGTTACAACGAGTTCAGCAGCCTGGCGCGCTTCTTGCCGTCCTTGTATTACGGCGAGCACG CCAACGGCGAGAAGGGGCCGCTGGCATGGTGA
Upstream 100 bases:
>100_bases TGACATGGCTTCTCATGTTGCTTGAATATGGAAACGTATATCGTTTCTTAAATTGCGCGCCTAGGGTCGGACCAGGCGCT CCAACGACAAGGAGTTTACT
Downstream 100 bases:
>100_bases GGCTTCAAGCGGGCCAAGCGGCGGGACGCTGGCTGCCCAGGTGCGCCGCCATCAGCGGCCACACCCAATCGGCCGCGTCC AGGCTCCAGCCGCCGTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQHIRWWHPHDHHRMHGWDKQW RRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADALAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHL VRDKPQGAVLRSRFVLGGESPVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW
Sequences:
>Translated_223_residues MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQHIRWWHPHDHHRMHGWDKQW RRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADALAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHL VRDKPQGAVLRSRFVLGGESPVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW >Mature_223_residues MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQHIRWWHPHDHHRMHGWDKQW RRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADALAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHL VRDKPQGAVLRSRFVLGGESPVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25234; Mature: 25234
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQ CCCCHHCCCHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH HIRWWHPHDHHRMHGWDKQWRRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADA HEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHH LAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHLVRDKPQGAVLRSRFVLGGES HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEECCCC PVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQ CCCCHHCCCHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH HIRWWHPHDHHRMHGWDKQWRRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADA HEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHH LAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHLVRDKPQGAVLRSRFVLGGES HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEECCCC PVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA