Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497293

Identifier: 34497293

GI number: 34497293

Start: 1994167

End: 1994838

Strand: Direct

Name: 34497293

Synonym: CV_1838

Alternate gene names: NA

Gene position: 1994167-1994838 (Clockwise)

Preceding gene: 34497291

Following gene: 34497302

Centisome position: 41.97

GC content: 66.22

Gene sequence:

>672_bases
GTGAACGCTCAGAATCGGATATCCAGCCATGACGAGCTGCTGTCGCCGCGCCCGCTGCCGCTGGAAACCGGCATCCGCCG
GCTGGACGACGGCCGCCTGCTGGTGGCGGTGAGAACCGAGCTGCCAGGCTGCGCCGGCAGGATGCTGGAGTGGTGGTTCA
AATTTTTCGAGACCACCCAGCACATCCGCTGGTGGCATCCGCACGACCATCACCGGATGCATGGCTGGGATAAGCAATGG
CGGCGAGGCGAGAGCTATGTCGGCGCTTGCGTGCGCGCGGAGGAGTCGCTGGGCGACTTTCCGCCGGTGACGGCGGCGCT
GAAGTTTCACGAGCCGGCAGATTTTTTCTCGGCCGACGCGCTGGCGCAGGCAAGACGCCAGCAGGCGGTGTCCGGGCTGG
TGTGCGCCCGGATCGCTTTCGGCGACGAGCCGCGCTTGGCGGCCGACGGCGATCCGCAGGATGGCGAAATGATCCACCTG
GTGCGCGACAAGCCGCAAGGCGCGGTGCTGCGCAGCCGCTTTGTGCTGGGCGGGGAGTCGCCGGTGCCGAACGAGTTGGG
TTTAGGGCTGATGCAGCATTGTTACAACGAGTTCAGCAGCCTGGCGCGCTTCTTGCCGTCCTTGTATTACGGCGAGCACG
CCAACGGCGAGAAGGGGCCGCTGGCATGGTGA

Upstream 100 bases:

>100_bases
TGACATGGCTTCTCATGTTGCTTGAATATGGAAACGTATATCGTTTCTTAAATTGCGCGCCTAGGGTCGGACCAGGCGCT
CCAACGACAAGGAGTTTACT

Downstream 100 bases:

>100_bases
GGCTTCAAGCGGGCCAAGCGGCGGGACGCTGGCTGCCCAGGTGCGCCGCCATCAGCGGCCACACCCAATCGGCCGCGTCC
AGGCTCCAGCCGCCGTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQHIRWWHPHDHHRMHGWDKQW
RRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADALAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHL
VRDKPQGAVLRSRFVLGGESPVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW

Sequences:

>Translated_223_residues
MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQHIRWWHPHDHHRMHGWDKQW
RRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADALAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHL
VRDKPQGAVLRSRFVLGGESPVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW
>Mature_223_residues
MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQHIRWWHPHDHHRMHGWDKQW
RRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADALAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHL
VRDKPQGAVLRSRFVLGGESPVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25234; Mature: 25234

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQ
CCCCHHCCCHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
HIRWWHPHDHHRMHGWDKQWRRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADA
HEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHH
LAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHLVRDKPQGAVLRSRFVLGGES
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEECCCC
PVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAQNRISSHDELLSPRPLPLETGIRRLDDGRLLVAVRTELPGCAGRMLEWWFKFFETTQ
CCCCHHCCCHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
HIRWWHPHDHHRMHGWDKQWRRGESYVGACVRAEESLGDFPPVTAALKFHEPADFFSADA
HEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHH
LAQARRQQAVSGLVCARIAFGDEPRLAADGDPQDGEMIHLVRDKPQGAVLRSRFVLGGES
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEECCCC
PVPNELGLGLMQHCYNEFSSLARFLPSLYYGEHANGEKGPLAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA