Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34497238

Identifier: 34497238

GI number: 34497238

Start: 1938687

End: 1939205

Strand: Reverse

Name: 34497238

Synonym: CV_1783

Alternate gene names: NA

Gene position: 1939205-1938687 (Counterclockwise)

Preceding gene: 34497239

Following gene: 34497234

Centisome position: 40.82

GC content: 68.59

Gene sequence:

>519_bases
ATGGTGATGGACGACGATATCACCGTGCAACCGATACGCGGCGTGCAGCCGCGTCCGGCCGGCAGCCATGAGCCGTTCGC
CGTCCCCTCCCGCGCCGGCCAGCATGGCAAACGCCCGGATGGAGAGGACAGCGCAGACATCAGCCTCAGCCAGGGCGCGC
AGGCCGCGGCGCTGTTGTTCAGCGCCGCCATGGATCAGATTTCCCGCCTGGCTGAGCTGGACATCGAACCAGTGCGTCTG
CCCGAAAGTGAGCTGACCGGCGACAGCCACAGCCAGCACCTGTTGCTGGGCATGGAGATCCTGATGGAGTTGTACCGCCA
GCAGCATCCCGACTGGACCGCCCCGGCCATCCGGCAGGCGTTCGCGCCGCTGGCGCGCGCCGGGCTGGAGCGCGGCTACC
AGGAAGCCTGCCAGGTGCTGCGCCAGCTCAATGTCTACACGCCCGCCGTCGCCGGCCAGCTGCAAGGCCTGCTCCTGCTG
ACCCAGCGGCTGTTCGAGGAGCGGCTGCAGATCGCCTGA

Upstream 100 bases:

>100_bases
TCCTGCAAAACATGCTGTCCGCCGGCGCGAAGGCCTCCCCGTCCGCCGCCGTATCGGGAAACAGCCAGGCCAGCGCTAGC
TGAACCCGGGGGAGGCGGCG

Downstream 100 bases:

>100_bases
CCGTCCCGCCCGCTTTCCCGCAAGCCGGGAATGCAACGGGCCGCGGCGCGCGTCATCCCGAGACCCGCCCCGCCAGCCGG
CTAAGAGCGGCTAACACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MVMDDDITVQPIRGVQPRPAGSHEPFAVPSRAGQHGKRPDGEDSADISLSQGAQAAALLFSAAMDQISRLAELDIEPVRL
PESELTGDSHSQHLLLGMEILMELYRQQHPDWTAPAIRQAFAPLARAGLERGYQEACQVLRQLNVYTPAVAGQLQGLLLL
TQRLFEERLQIA

Sequences:

>Translated_172_residues
MVMDDDITVQPIRGVQPRPAGSHEPFAVPSRAGQHGKRPDGEDSADISLSQGAQAAALLFSAAMDQISRLAELDIEPVRL
PESELTGDSHSQHLLLGMEILMELYRQQHPDWTAPAIRQAFAPLARAGLERGYQEACQVLRQLNVYTPAVAGQLQGLLLL
TQRLFEERLQIA
>Mature_172_residues
MVMDDDITVQPIRGVQPRPAGSHEPFAVPSRAGQHGKRPDGEDSADISLSQGAQAAALLFSAAMDQISRLAELDIEPVRL
PESELTGDSHSQHLLLGMEILMELYRQQHPDWTAPAIRQAFAPLARAGLERGYQEACQVLRQLNVYTPAVAGQLQGLLLL
TQRLFEERLQIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18899; Mature: 18899

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMDDDITVQPIRGVQPRPAGSHEPFAVPSRAGQHGKRPDGEDSADISLSQGAQAAALLF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHH
SAAMDQISRLAELDIEPVRLPESELTGDSHSQHLLLGMEILMELYRQQHPDWTAPAIRQA
HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FAPLARAGLERGYQEACQVLRQLNVYTPAVAGQLQGLLLLTQRLFEERLQIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVMDDDITVQPIRGVQPRPAGSHEPFAVPSRAGQHGKRPDGEDSADISLSQGAQAAALLF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHH
SAAMDQISRLAELDIEPVRLPESELTGDSHSQHLLLGMEILMELYRQQHPDWTAPAIRQA
HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FAPLARAGLERGYQEACQVLRQLNVYTPAVAGQLQGLLLLTQRLFEERLQIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA