| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497211
Identifier: 34497211
GI number: 34497211
Start: 1910267
End: 1911244
Strand: Reverse
Name: 34497211
Synonym: CV_1756
Alternate gene names: NA
Gene position: 1911244-1910267 (Counterclockwise)
Preceding gene: 34497212
Following gene: 34497210
Centisome position: 40.23
GC content: 64.42
Gene sequence:
>978_bases ATGAGCGAGCCATTCACCCCTGGCGATCTGAAAACCATCCTTCACTCCAAGCGAGCCAACCTCTACTACCTGGAACACTG CCGGGTGCTGGTCAACGGCGGCCGCGTCGAATACGTCACCGATGCCGGCAAGCAATCGCTGTATTGGAACATTCCCATCG CCAACACCACCACCCTGTTGCTGGGCACCGGCACCTCCGTTACCCAGGCGGCGATGCGCGAACTGGCCAAGGCCGGCGTG ATGGTGGGATTCTGCGGCGGAGGCGGCACGCCGCTGTTCAGCGCCGGAGAAGTAGAAATGGAAGTGGCCTGGCAGTCGCC GCAAAGCGAATACCGCCCCACCGAATACCTTCAATGGTGGGCTCGCTTCTGGTTCGACGACGACAAACGGCTGCAAGCCG CCAAACAATTGCAGCAAGCGCGGCTTGCCCGCATCCGCGCGCAATGGCTGGACAACCGCCAGTTGCGCGAGGCCGGCTTT GAAATCGAACCCTCCCGGCTGACACAGCTGCTCGACGCCAGCCTCGCCTCGCTGGAGCGCGCGCCGGACCATACCGCCCT GCTGACGGAAGAGGCCCGCTTGTCCAAACAGCTGTTCCGGCTGGCGGCGCAAGCCACCGCTTATGGCGAATTCACGCGCG CCAAGCGCGGCGGCGGCGTGGATCCAGCCAACCGTTTTCTGGACCACGGCAACTACCTGGCCTACGGCCTCGGCGCCACC GCCGCCTGGGTGTTGGGGTTGCCGCACAGCCTGGCTATCCTGCACGGCAAAACCCGCCGCGGCGGCCTGGTGTTCGACGC CGCGGACTTGGTCAAAGACGCAGCCATCCTGCCGCAAGCCTTCGTCAGCGCGATGAAGGGCGACGACGAACAAACCTTCC GCCAACAATGCATCGAACAGCTGGCGCGCGGCGAGGCGCTGGACTTCATGATCGATCAGCTTCAGCGCATCGCGGAGCAA CTGGGGCGGGATGGATGA
Upstream 100 bases:
>100_bases GGACTGCGCCATACACATTCGGCATCGGCTTGCGTCCCATCAACGCGAAAATATTTACATTGAGTAAAATATCGCTCCTC CTCTCTGCCGGACACGGACC
Downstream 100 bases:
>100_bases ACATCCTGCTGATCTCGCAATGCGACAAGCGGGCGCTGACTGAAACCCGCCGCATCCTGGACCAGTTCGCCGAGCGCCGC GGCGACCGCGTCTGGCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSEPFTPGDLKTILHSKRANLYYLEHCRVLVNGGRVEYVTDAGKQSLYWNIPIANTTTLLLGTGTSVTQAAMRELAKAGV MVGFCGGGGTPLFSAGEVEMEVAWQSPQSEYRPTEYLQWWARFWFDDDKRLQAAKQLQQARLARIRAQWLDNRQLREAGF EIEPSRLTQLLDASLASLERAPDHTALLTEEARLSKQLFRLAAQATAYGEFTRAKRGGGVDPANRFLDHGNYLAYGLGAT AAWVLGLPHSLAILHGKTRRGGLVFDAADLVKDAAILPQAFVSAMKGDDEQTFRQQCIEQLARGEALDFMIDQLQRIAEQ LGRDG
Sequences:
>Translated_325_residues MSEPFTPGDLKTILHSKRANLYYLEHCRVLVNGGRVEYVTDAGKQSLYWNIPIANTTTLLLGTGTSVTQAAMRELAKAGV MVGFCGGGGTPLFSAGEVEMEVAWQSPQSEYRPTEYLQWWARFWFDDDKRLQAAKQLQQARLARIRAQWLDNRQLREAGF EIEPSRLTQLLDASLASLERAPDHTALLTEEARLSKQLFRLAAQATAYGEFTRAKRGGGVDPANRFLDHGNYLAYGLGAT AAWVLGLPHSLAILHGKTRRGGLVFDAADLVKDAAILPQAFVSAMKGDDEQTFRQQCIEQLARGEALDFMIDQLQRIAEQ LGRDG >Mature_324_residues SEPFTPGDLKTILHSKRANLYYLEHCRVLVNGGRVEYVTDAGKQSLYWNIPIANTTTLLLGTGTSVTQAAMRELAKAGVM VGFCGGGGTPLFSAGEVEMEVAWQSPQSEYRPTEYLQWWARFWFDDDKRLQAAKQLQQARLARIRAQWLDNRQLREAGFE IEPSRLTQLLDASLASLERAPDHTALLTEEARLSKQLFRLAAQATAYGEFTRAKRGGGVDPANRFLDHGNYLAYGLGATA AWVLGLPHSLAILHGKTRRGGLVFDAADLVKDAAILPQAFVSAMKGDDEQTFRQQCIEQLARGEALDFMIDQLQRIAEQL GRDG
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36058; Mature: 35927
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPFTPGDLKTILHSKRANLYYLEHCRVLVNGGRVEYVTDAGKQSLYWNIPIANTTTLL CCCCCCCHHHHHHHHHHCCCEEEEEHHHEEECCCEEEEEECCCCCCEEEECCCCCCEEEE LGTGTSVTQAAMRELAKAGVMVGFCGGGGTPLFSAGEVEMEVAWQSPQSEYRPTEYLQWW EECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH ARFWFDDDKRLQAAKQLQQARLARIRAQWLDNRQLREAGFEIEPSRLTQLLDASLASLER HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHC APDHTALLTEEARLSKQLFRLAAQATAYGEFTRAKRGGGVDPANRFLDHGNYLAYGLGAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCHH AAWVLGLPHSLAILHGKTRRGGLVFDAADLVKDAAILPQAFVSAMKGDDEQTFRQQCIEQ HHHHHCCCCHHEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LARGEALDFMIDQLQRIAEQLGRDG HHCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEPFTPGDLKTILHSKRANLYYLEHCRVLVNGGRVEYVTDAGKQSLYWNIPIANTTTLL CCCCCCHHHHHHHHHHCCCEEEEEHHHEEECCCEEEEEECCCCCCEEEECCCCCCEEEE LGTGTSVTQAAMRELAKAGVMVGFCGGGGTPLFSAGEVEMEVAWQSPQSEYRPTEYLQWW EECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH ARFWFDDDKRLQAAKQLQQARLARIRAQWLDNRQLREAGFEIEPSRLTQLLDASLASLER HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHC APDHTALLTEEARLSKQLFRLAAQATAYGEFTRAKRGGGVDPANRFLDHGNYLAYGLGAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCHH AAWVLGLPHSLAILHGKTRRGGLVFDAADLVKDAAILPQAFVSAMKGDDEQTFRQQCIEQ HHHHHCCCCHHEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LARGEALDFMIDQLQRIAEQLGRDG HHCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA