Click here to switch to the map view.

The map label for this gene is 34497208

Identifier: 34497208

GI number: 34497208

Start: 1904346

End: 1905344

Strand: Reverse

Name: 34497208

Synonym: CV_1753

Alternate gene names: NA

Gene position: 1905344-1904346 (Counterclockwise)

Preceding gene: 34497209

Following gene: 34497207

Centisome position: 40.1

GC content: 68.27

Gene sequence:

>999_bases
ATGCCGATTAATCCCCGCTCTCTCGCCCAAGGCCTGCTGATTCTGCCCCGGCTGCGCGTGCAGAACGCCAACGCCCTCTC
CAGCCCGCACACCTGGGGCTTTCCCGCGTTGTCGGCCTTCACCGGCCTGATGACGGCGCTGGAGCGCAAGCTGGGCGCGG
ACAGCGAGCTGGCATTCCACGGCGTCGGCGTCATCTGCCACGGCTACCAGGCCCACACCAACGGCGACTACATCCAGCGC
TTCAATCTCAGCCGCAATCCGGTGGACAAGGATGGCGGCACGGCCGCCATCGTCGAGGAAGGACGCATCCACCTCGACCT
CACCCTGGTCTTCGGCGTAAGCGGCAACGCGCTGGCGCAAAACGACGACGCGCTGGCGGAGCGAGCCGCCGCAATCAGCC
GCGCGCTGGAAACCATGCGCGTGGCGGGCGGCACGCTGATTCCGCCCCCCGCCGGCCATTACGCGCCCAAGCCGCAATTG
ATCACCCTGCCGGAAGGCGAGGACGAACGCGCCGCGCGATTCCGCGCCCTGCGCCGCCGCTGGCTGCCCGGCTTTGCGCT
GGTGGCCCGCGACGACCTGCTGAGCGGCCACCATGCCAGGCTGCGCGAGACAGCGCCCGGCGCCACGCTGCTGGACGCCT
GGCTGGACAAATCCCGCCTCAACCACTGGCCGGAAGCCGGCGATGGCGGCCAAACCATCTGGCGGCACTCGCGCCAGCAG
GGCGAAGGCTGGATCGTGCCCATCCCTGTGGGCTATGGCGCGCTCTCCGAACTTTACCCTGCCGGCAGCGTGGCCAACGC
GCGAGACGCCGCCGCGCCGTTCCGCTTTGTGGAAAGCCTGTACTCGCTGGGCGAATGGATCAGCCCGCACCGCCTGCAGG
ATGCCGCCGATCTGCTGTGGTACCCCGCCTACGATGCCGAACTTGGCGTCTACCGCTGCCGCAACGATTACCAACCCCCC
TCCCCCTCCACTCAAAACGATTTGGGAGTTGAAGCATGA

Upstream 100 bases:

>100_bases
GAGCTGGCGCACGACATCGACTGGCAGCGCCAGCAGGACAATAAGCTGCGCGAGCAAAACACCCGCTTGCTGCCCGCTGG
ACATAATCCGGGAGGCCAAA

Downstream 100 bases:

>100_bases
GCAAGCTGGAAAATCCGTCCGTCCTCGCCTTCGAACGCAAGCTGGATCCGTCCGACGCCTTGTTCTACGCCGGAAACTGG
GATGCCCGCGACGCCAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csy2 Family Protein; Csy2 Family CRISPR-Associated Protein; CRISPR-Associated Protein Family Protein

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MPINPRSLAQGLLILPRLRVQNANALSSPHTWGFPALSAFTGLMTALERKLGADSELAFHGVGVICHGYQAHTNGDYIQR
FNLSRNPVDKDGGTAAIVEEGRIHLDLTLVFGVSGNALAQNDDALAERAAAISRALETMRVAGGTLIPPPAGHYAPKPQL
ITLPEGEDERAARFRALRRRWLPGFALVARDDLLSGHHARLRETAPGATLLDAWLDKSRLNHWPEAGDGGQTIWRHSRQQ
GEGWIVPIPVGYGALSELYPAGSVANARDAAAPFRFVESLYSLGEWISPHRLQDAADLLWYPAYDAELGVYRCRNDYQPP
SPSTQNDLGVEA

Sequences:

>Translated_332_residues
MPINPRSLAQGLLILPRLRVQNANALSSPHTWGFPALSAFTGLMTALERKLGADSELAFHGVGVICHGYQAHTNGDYIQR
FNLSRNPVDKDGGTAAIVEEGRIHLDLTLVFGVSGNALAQNDDALAERAAAISRALETMRVAGGTLIPPPAGHYAPKPQL
ITLPEGEDERAARFRALRRRWLPGFALVARDDLLSGHHARLRETAPGATLLDAWLDKSRLNHWPEAGDGGQTIWRHSRQQ
GEGWIVPIPVGYGALSELYPAGSVANARDAAAPFRFVESLYSLGEWISPHRLQDAADLLWYPAYDAELGVYRCRNDYQPP
SPSTQNDLGVEA
>Mature_331_residues
PINPRSLAQGLLILPRLRVQNANALSSPHTWGFPALSAFTGLMTALERKLGADSELAFHGVGVICHGYQAHTNGDYIQRF
NLSRNPVDKDGGTAAIVEEGRIHLDLTLVFGVSGNALAQNDDALAERAAAISRALETMRVAGGTLIPPPAGHYAPKPQLI
TLPEGEDERAARFRALRRRWLPGFALVARDDLLSGHHARLRETAPGATLLDAWLDKSRLNHWPEAGDGGQTIWRHSRQQG
EGWIVPIPVGYGALSELYPAGSVANARDAAAPFRFVESLYSLGEWISPHRLQDAADLLWYPAYDAELGVYRCRNDYQPPS
PSTQNDLGVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36184; Mature: 36053

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPINPRSLAQGLLILPRLRVQNANALSSPHTWGFPALSAFTGLMTALERKLGADSELAFH
CCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
GVGVICHGYQAHTNGDYIQRFNLSRNPVDKDGGTAAIVEEGRIHLDLTLVFGVSGNALAQ
CCEEEEECEEECCCCCHHEEECCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCC
NDDALAERAAAISRALETMRVAGGTLIPPPAGHYAPKPQLITLPEGEDERAARFRALRRR
CCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
WLPGFALVARDDLLSGHHARLRETAPGATLLDAWLDKSRLNHWPEAGDGGQTIWRHSRQQ
CCCCEEEEEHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
GEGWIVPIPVGYGALSELYPAGSVANARDAAAPFRFVESLYSLGEWISPHRLQDAADLLW
CCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEE
YPAYDAELGVYRCRNDYQPPSPSTQNDLGVEA
ECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PINPRSLAQGLLILPRLRVQNANALSSPHTWGFPALSAFTGLMTALERKLGADSELAFH
CCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
GVGVICHGYQAHTNGDYIQRFNLSRNPVDKDGGTAAIVEEGRIHLDLTLVFGVSGNALAQ
CCEEEEECEEECCCCCHHEEECCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCC
NDDALAERAAAISRALETMRVAGGTLIPPPAGHYAPKPQLITLPEGEDERAARFRALRRR
CCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
WLPGFALVARDDLLSGHHARLRETAPGATLLDAWLDKSRLNHWPEAGDGGQTIWRHSRQQ
CCCCEEEEEHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
GEGWIVPIPVGYGALSELYPAGSVANARDAAAPFRFVESLYSLGEWISPHRLQDAADLLW
CCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEE
YPAYDAELGVYRCRNDYQPPSPSTQNDLGVEA
ECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA