| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497204
Identifier: 34497204
GI number: 34497204
Start: 1901633
End: 1902022
Strand: Reverse
Name: 34497204
Synonym: CV_1749
Alternate gene names: NA
Gene position: 1902022-1901633 (Counterclockwise)
Preceding gene: 34497205
Following gene: 34497193
Centisome position: 40.03
GC content: 54.36
Gene sequence:
>390_bases CTGCCGGATAGGCAGCTTAGAAAGCCCGAACCGCCATTGAGCGTAATGCTGACTCGTTCACTGCCGGATAGGCAGCTTAG AAATGCGCAATTCAACCCTGCTGCGGCTGTTGAATGTTCACTGCCGGATAGGCAGCTTAGAAATCGCCCAGGTGAGTTCG GTGTCGATCACAGCAGTTCACTGCCGGATAGGCAGCTTAGAAATCCAGCGCGCTGGGCAAACCCAACTACTACGGGTTCA CTGCCGGATAGGCAGCTTAGAAAACACCCAGACACCCATATAGACGTCACACCGAGTTCACTGCCGGATAGGCAGCTTAG AAAAGGTCAGCCCGCGCTCGCTCTCGCTCGAAAACGTTCACTGCCGGATAGGCAGCTTAGAAATACCTGA
Upstream 100 bases:
>100_bases AAAATCTGCCGCCCTGCCGTGACGCGCCCCTTCGCGTTCACTGCCGGATAGGCAGCTTAGAAATGTCCAAGACGCCACGC ATACGTGATGTTCAAGTTCA
Downstream 100 bases:
>100_bases AACCTGGCCATTTCATGAACCCAGAGTTCACTGCCGGATAGGCAGCTTAGAAAAATGCCAATACCGGCAGCAAAACAATC AATCTGTTCACTGCCGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPDRQLRKPEPPLSVMLTRSLPDRQLRNAQFNPAAAVECSLPDRQLRNRPGEFGVDHSSSLPDRQLRNPARWANPTTTGS LPDRQLRKHPDTHIDVTPSSLPDRQLRKGQPALALARKRSLPDRQLRNT
Sequences:
>Translated_129_residues MPDRQLRKPEPPLSVMLTRSLPDRQLRNAQFNPAAAVECSLPDRQLRNRPGEFGVDHSSSLPDRQLRNPARWANPTTTGS LPDRQLRKHPDTHIDVTPSSLPDRQLRKGQPALALARKRSLPDRQLRNT >Mature_128_residues PDRQLRKPEPPLSVMLTRSLPDRQLRNAQFNPAAAVECSLPDRQLRNRPGEFGVDHSSSLPDRQLRNPARWANPTTTGSL PDRQLRKHPDTHIDVTPSSLPDRQLRKGQPALALARKRSLPDRQLRNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14663; Mature: 14532
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRQLRKPEPPLSVMLTRSLPDRQLRNAQFNPAAAVECSLPDRQLRNRPGEFGVDHSSS CCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC LPDRQLRNPARWANPTTTGSLPDRQLRKHPDTHIDVTPSSLPDRQLRKGQPALALARKRS CCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHC LPDRQLRNT CCHHHCCCC >Mature Secondary Structure PDRQLRKPEPPLSVMLTRSLPDRQLRNAQFNPAAAVECSLPDRQLRNRPGEFGVDHSSS CCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC LPDRQLRNPARWANPTTTGSLPDRQLRKHPDTHIDVTPSSLPDRQLRKGQPALALARKRS CCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHC LPDRQLRNT CCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA