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The map label for this gene is mcpA [H]

Identifier: 34497132

GI number: 34497132

Start: 1818826

End: 1819779

Strand: Direct

Name: mcpA [H]

Synonym: CV_1677

Alternate gene names: 34497132

Gene position: 1818826-1819779 (Clockwise)

Preceding gene: 34497130

Following gene: 34497140

Centisome position: 38.28

GC content: 68.66

Gene sequence:

>954_bases
GTGCTGCTGGGTCTGCTGCTGCTGTTGCTGCCTATCGGCCTGGCCGTGCTGGTGGGCCGCAACATCATACGCACGCTGGG
CGCGGAGCCAGACGAAGTGGCGCGCGGCATGCGCGAGCTGTCCGCCGGCCGGCTGGATTTCTTCCTGCCGCTGCGGCATG
GCGACGACCACAGCCTGGCCGCCCACATCCGCCAGATGGGAGAGCGCTTGTCCGGCGTGATCCTGCAGGTGAAGGAGGAC
GCCGACGCGGTGGCCAACGCCTCCACCGAGCTGAATTCGGCGTCGCAAGGCTTGTCCCAGGGCGCGGCGCGCACTTCGTC
GGACGTGGAGGAGAGCAGCAGCGCGATAGACGACATCGCCCGTTGCATGTTCCACATGGCCGGCGACGCCAACGACGCCG
GCTGCATGGCGGACACCGCCAGCGGGCAGGCGGCCGAAGGCAACCGGGTGGTGCAGCAGACGATCGCGGCGATGCGCCAG
ATCGCCAAGCGCACCGACATCATCGATGACATCGCCTACCAGACTAATCTGCTGGCGCTGAACGCGGCGATAGAGGCGGC
GAGGGCGGGCGAGCACGGCCGGGGCTTCGCGGTGGTGGCGGACGAGGTGCGCAAGCTGGCGATGCGCAGCCAGACGGCGG
CCAAGGAGATAGGCAAAGTGGCGATAGACAGCGTCGAGCTGGCGGAAAACGCCGGCCAGCAGTTGAGCGACATCGTCGAA
TCCAGCCGCCAGACGCTGGAGCTGGTGAAGGGCATTTCCAGCGAGGCGACGACGCAGGCGCAGCGGGTGGGCGGGATCAA
CCAGGCGATGCAGCGGCTGAACCAGCTGTCGCAGGACAATGCCGCCGCCAGCGAGGAGCTGTCGGCGGCGGCGCAGGAGG
TGGCGATGCGCGCCGACAGCCTGCGCCGGCAGATGCATTACTTTCAGCAGGGCGCGCAGCCCCCGGCGGATTGA

Upstream 100 bases:

>100_bases
CAGGATAGCGGAGCTGTACCAGCTGCAGAGCCAGTTGCTGCAGCAAATCCGCCGGCAGCTGGACGCGCAGGCGCATAGCG
CGCGGGTGTACGGCTACCTG

Downstream 100 bases:

>100_bases
CGGTCAGCGCACCTCGCGCAGATTGTCGCGGTCGAAGCGCAGCCGCACCGGCGCGCCGGCCGGCAGCAGGTCGCCCGCGT
GGCGGTTGAGCCGGTCCACT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLLGLLLLLLPIGLAVLVGRNIIRTLGAEPDEVARGMRELSAGRLDFFLPLRHGDDHSLAAHIRQMGERLSGVILQVKED
ADAVANASTELNSASQGLSQGAARTSSDVEESSSAIDDIARCMFHMAGDANDAGCMADTASGQAAEGNRVVQQTIAAMRQ
IAKRTDIIDDIAYQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAMRSQTAAKEIGKVAIDSVELAENAGQQLSDIVE
SSRQTLELVKGISSEATTQAQRVGGINQAMQRLNQLSQDNAAASEELSAAAQEVAMRADSLRRQMHYFQQGAQPPAD

Sequences:

>Translated_317_residues
MLLGLLLLLLPIGLAVLVGRNIIRTLGAEPDEVARGMRELSAGRLDFFLPLRHGDDHSLAAHIRQMGERLSGVILQVKED
ADAVANASTELNSASQGLSQGAARTSSDVEESSSAIDDIARCMFHMAGDANDAGCMADTASGQAAEGNRVVQQTIAAMRQ
IAKRTDIIDDIAYQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAMRSQTAAKEIGKVAIDSVELAENAGQQLSDIVE
SSRQTLELVKGISSEATTQAQRVGGINQAMQRLNQLSQDNAAASEELSAAAQEVAMRADSLRRQMHYFQQGAQPPAD
>Mature_317_residues
MLLGLLLLLLPIGLAVLVGRNIIRTLGAEPDEVARGMRELSAGRLDFFLPLRHGDDHSLAAHIRQMGERLSGVILQVKED
ADAVANASTELNSASQGLSQGAARTSSDVEESSSAIDDIARCMFHMAGDANDAGCMADTASGQAAEGNRVVQQTIAAMRQ
IAKRTDIIDDIAYQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAMRSQTAAKEIGKVAIDSVELAENAGQQLSDIVE
SSRQTLELVKGISSEATTQAQRVGGINQAMQRLNQLSQDNAAASEELSAAAQEVAMRADSLRRQMHYFQQGAQPPAD

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=326, Percent_Identity=30.0613496932515, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI2367378, Length=297, Percent_Identity=31.986531986532, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788195, Length=264, Percent_Identity=34.0909090909091, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=33.8645418326693, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788194, Length=265, Percent_Identity=32.0754716981132, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 33639; Mature: 33639

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGLLLLLLPIGLAVLVGRNIIRTLGAEPDEVARGMRELSAGRLDFFLPLRHGDDHSLA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
AHIRQMGERLSGVILQVKEDADAVANASTELNSASQGLSQGAARTSSDVEESSSAIDDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RCMFHMAGDANDAGCMADTASGQAAEGNRVVQQTIAAMRQIAKRTDIIDDIAYQTNLLAL
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAIEAARAGEHGRGFAVVADEVRKLAMRSQTAAKEIGKVAIDSVELAENAGQQLSDIVE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSRQTLELVKGISSEATTQAQRVGGINQAMQRLNQLSQDNAAASEELSAAAQEVAMRADS
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LRRQMHYFQQGAQPPAD
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLLGLLLLLLPIGLAVLVGRNIIRTLGAEPDEVARGMRELSAGRLDFFLPLRHGDDHSLA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
AHIRQMGERLSGVILQVKEDADAVANASTELNSASQGLSQGAARTSSDVEESSSAIDDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RCMFHMAGDANDAGCMADTASGQAAEGNRVVQQTIAAMRQIAKRTDIIDDIAYQTNLLAL
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAIEAARAGEHGRGFAVVADEVRKLAMRSQTAAKEIGKVAIDSVELAENAGQQLSDIVE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSRQTLELVKGISSEATTQAQRVGGINQAMQRLNQLSQDNAAASEELSAAAQEVAMRADS
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LRRQMHYFQQGAQPPAD
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]