| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497118
Identifier: 34497118
GI number: 34497118
Start: 1802202
End: 1802978
Strand: Reverse
Name: 34497118
Synonym: CV_1663
Alternate gene names: NA
Gene position: 1802978-1802202 (Counterclockwise)
Preceding gene: 34497119
Following gene: 34497117
Centisome position: 37.95
GC content: 66.41
Gene sequence:
>777_bases ATGGCCATGATCGCGCCGGAAACGCTTTGCCTGCCGCTGGCCCTGTGCGCGGCGCAGGCCCTTGCCTGCAACGGCACCGC CACGCCGGAAACCGCGCCTCGGGTGGATGCTCCCGACCTGCGCGGCATCGCGGTATACCTGCCGCGGGTGCTGGAAAACA GCGAGTCCGGCCCCTTCGCCGACCTGCTGCAAACCATCGCCCGCCACTACCCGGCCGGCAGGATCAGCTTCGAGATCAAG CCGGTCAAGCGCGTCTACCTGGACACGGACGACCGCGGGGCCGACTTCCGCTTCCCCATCATGAAAGTGCGCGACAACGC CGACGGCGCCACGCCCTACCAGTTCTCCCACGAGATGATGGGCAAGGTCACCTTCGTGCTTTATTCCCATCAGGCCAAGC CGTTGCGCAAGATCGACATCCTGCGCACCGCCAACCTCGCGCGGTATGCGGTGGAGGCGCCGCCGGTCAACTGGGGCTTC CCCAGCAAGAGCGTGGTCAACCTGGAGCTGTCGCTGAAGCAGCTGAATCTGGGGCGGGTCGACGCCGTGCTGTGGGCGCA GGAGGAAGCCGACTACCTGGTGCGCAAGAACAAGCTCAGCCACATCCATCGCGAGCATTTCGACGACTTCCCCGACGTGC TGTTCATGTCCTGCAACCGCCGGGGCGACTTCGTCAATCAGGCGCTCAGCCGCGCCATCAGGGCCGCCCGCGCCAGCGGC GAGCTGCAGAAGGCCTACGCCAGAGTGCACCAGCCCTATCAGGACTGGCAGCCGTAG
Upstream 100 bases:
>100_bases GGGCATTCCCGGCTGACGCCCCCTCCCCCCCTGTGCTACACCCAAATCAGCAAGCGCCGCTCCATACAAGGCGCGATACG AGACGGATGGATGCGAGGGG
Downstream 100 bases:
>100_bases CGGCCCGCCGCCGCTCGCCCCCGCCACGCCGCCGCTCGCGACGCCAGGCTGCCGCTCGCCGACTTCGGGCGCCGGCGCAC GTCCTTTACGGCGTAAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAMIAPETLCLPLALCAAQALACNGTATPETAPRVDAPDLRGIAVYLPRVLENSESGPFADLLQTIARHYPAGRISFEIK PVKRVYLDTDDRGADFRFPIMKVRDNADGATPYQFSHEMMGKVTFVLYSHQAKPLRKIDILRTANLARYAVEAPPVNWGF PSKSVVNLELSLKQLNLGRVDAVLWAQEEADYLVRKNKLSHIHREHFDDFPDVLFMSCNRRGDFVNQALSRAIRAARASG ELQKAYARVHQPYQDWQP
Sequences:
>Translated_258_residues MAMIAPETLCLPLALCAAQALACNGTATPETAPRVDAPDLRGIAVYLPRVLENSESGPFADLLQTIARHYPAGRISFEIK PVKRVYLDTDDRGADFRFPIMKVRDNADGATPYQFSHEMMGKVTFVLYSHQAKPLRKIDILRTANLARYAVEAPPVNWGF PSKSVVNLELSLKQLNLGRVDAVLWAQEEADYLVRKNKLSHIHREHFDDFPDVLFMSCNRRGDFVNQALSRAIRAARASG ELQKAYARVHQPYQDWQP >Mature_257_residues AMIAPETLCLPLALCAAQALACNGTATPETAPRVDAPDLRGIAVYLPRVLENSESGPFADLLQTIARHYPAGRISFEIKP VKRVYLDTDDRGADFRFPIMKVRDNADGATPYQFSHEMMGKVTFVLYSHQAKPLRKIDILRTANLARYAVEAPPVNWGFP SKSVVNLELSLKQLNLGRVDAVLWAQEEADYLVRKNKLSHIHREHFDDFPDVLFMSCNRRGDFVNQALSRAIRAARASGE LQKAYARVHQPYQDWQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29034; Mature: 28902
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMIAPETLCLPLALCAAQALACNGTATPETAPRVDAPDLRGIAVYLPRVLENSESGPFA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH DLLQTIARHYPAGRISFEIKPVKRVYLDTDDRGADFRFPIMKVRDNADGATPYQFSHEMM HHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCEECCEEEEECCCCCCCCHHHHHHHH GKVTFVLYSHQAKPLRKIDILRTANLARYAVEAPPVNWGFPSKSVVNLELSLKQLNLGRV HHEEEEEEECCCCCHHHHHHHHHCCHHHHEEECCCCCCCCCCCCEEEEEEEEECCCCCCH DAVLWAQEEADYLVRKNKLSHIHREHFDDFPDVLFMSCNRRGDFVNQALSRAIRAARASG HHEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC ELQKAYARVHQPYQDWQP HHHHHHHHHHCCHHCCCC >Mature Secondary Structure AMIAPETLCLPLALCAAQALACNGTATPETAPRVDAPDLRGIAVYLPRVLENSESGPFA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH DLLQTIARHYPAGRISFEIKPVKRVYLDTDDRGADFRFPIMKVRDNADGATPYQFSHEMM HHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCEECCEEEEECCCCCCCCHHHHHHHH GKVTFVLYSHQAKPLRKIDILRTANLARYAVEAPPVNWGFPSKSVVNLELSLKQLNLGRV HHEEEEEEECCCCCHHHHHHHHHCCHHHHEEECCCCCCCCCCCCEEEEEEEEECCCCCCH DAVLWAQEEADYLVRKNKLSHIHREHFDDFPDVLFMSCNRRGDFVNQALSRAIRAARASG HHEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC ELQKAYARVHQPYQDWQP HHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA