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The map label for this gene is trg [H]

Identifier: 34497107

GI number: 34497107

Start: 1789398

End: 1790351

Strand: Reverse

Name: trg [H]

Synonym: CV_1652

Alternate gene names: 34497107

Gene position: 1790351-1789398 (Counterclockwise)

Preceding gene: 34497117

Following gene: 34497102

Centisome position: 37.68

GC content: 70.44

Gene sequence:

>954_bases
CTGTTCGCCGCCATCTCCGCCGTCAGCCTGCTGGCGCTGGCCGGCGCCATCGCCCAGATCGGGCGGGGATTGTTCCGCCA
GGTCGGCGGCGAGCCGGCGATGGTGGCCGAGGTCGCCCACCGGGTGGCCAGCGGCGACCTGACCGTGAAACTCGAGCCGC
GCGGCGGCGACGATCGCAGCGTGCTGGCGGCGATGCAGCACATGGTGAGCCGGCTGACCGGCGTGATCGAGCAGCTGCGG
CTGGACGCCGAACAGCTGAACGCCACTTCGTCCGAGGTTTCCGCCTCGGCGCAGTCGCTGAGCCAGAGCGCGTCGCAGCA
GGCCGCCAGCCTGGAGGAGACCAGCGCCTCGGTGGAACAGATCGCCGCCACGGTGTCGCAGAACTCGGAAAGCGCCCATC
TGACCGACACCATGGCCAGCCAGGCGGCGCTGCTGGCCAACTGTGGCGGCGAGGCCGTGTCGCGCACGGTGGCGGCGATA
CGCGACATTTCCAGCCGGATAGACGTGATAGACGACATCGCCTACCAGACCAATCTGCTGGCCTTGAACGCCGCCATCGA
GGCCGCCCAGGCCGGCAGCCACGGCCGGGGCTTCACCGTGGTGGCCGCCCAGGTGCGCAAGCTGGCCGAGCGCAGCCAGG
ACGCGGCGCGGGAAATCTGCGCGCTGGCCGGCGGCAGCGTGGACATGGCGGAGCAGGCGGGCACGGCGCTGGGCGAGATG
CTGCCGGCGATCCGCAAGACCGCCGAGCTGGTTCAGGAAATCGCGCTGGCCTCGCAGGAACAGAGCGAGGGCCTGCAGCA
GATCAATACCGCCGTCTGCCATCTGTCGCTGGCCACCCAGCTGAGCGCCTCCACCTCGGAGCAGCTGTCCGCCGCTTCCG
ACCAGTTGAACGCGCAGGCCGACCAGCTGCGGCGGATGATCGCTTACTTCAGGACACGCGCCGCGCCGGCATGA

Upstream 100 bases:

>100_bases
CCGGCTGCTGCGGCAAAGCGCAGGCGTGCAGGAAGGATTCGAGCGCACGCTGGCCGAGCAGATCGCCGAGGCGGACAAGG
GCTACCGCCATACCCGCGAC

Downstream 100 bases:

>100_bases
AAAAAGCGGCCCGTTACGGGGCCGCTTCGCATGCTGACGGACGCGGGACTCAGCGCCAGTCCAGGATCACCTTGCCGCTC
TGGCCGGACAGCATCGCGGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MFAAISAVSLLALAGAIAQIGRGLFRQVGGEPAMVAEVAHRVASGDLTVKLEPRGGDDRSVLAAMQHMVSRLTGVIEQLR
LDAEQLNATSSEVSASAQSLSQSASQQAASLEETSASVEQIAATVSQNSESAHLTDTMASQAALLANCGGEAVSRTVAAI
RDISSRIDVIDDIAYQTNLLALNAAIEAAQAGSHGRGFTVVAAQVRKLAERSQDAAREICALAGGSVDMAEQAGTALGEM
LPAIRKTAELVQEIALASQEQSEGLQQINTAVCHLSLATQLSASTSEQLSAASDQLNAQADQLRRMIAYFRTRAAPA

Sequences:

>Translated_317_residues
MFAAISAVSLLALAGAIAQIGRGLFRQVGGEPAMVAEVAHRVASGDLTVKLEPRGGDDRSVLAAMQHMVSRLTGVIEQLR
LDAEQLNATSSEVSASAQSLSQSASQQAASLEETSASVEQIAATVSQNSESAHLTDTMASQAALLANCGGEAVSRTVAAI
RDISSRIDVIDDIAYQTNLLALNAAIEAAQAGSHGRGFTVVAAQVRKLAERSQDAAREICALAGGSVDMAEQAGTALGEM
LPAIRKTAELVQEIALASQEQSEGLQQINTAVCHLSLATQLSASTSEQLSAASDQLNAQADQLRRMIAYFRTRAAPA
>Mature_317_residues
MFAAISAVSLLALAGAIAQIGRGLFRQVGGEPAMVAEVAHRVASGDLTVKLEPRGGDDRSVLAAMQHMVSRLTGVIEQLR
LDAEQLNATSSEVSASAQSLSQSASQQAASLEETSASVEQIAATVSQNSESAHLTDTMASQAALLANCGGEAVSRTVAAI
RDISSRIDVIDDIAYQTNLLALNAAIEAAQAGSHGRGFTVVAAQVRKLAERSQDAAREICALAGGSVDMAEQAGTALGEM
LPAIRKTAELVQEIALASQEQSEGLQQINTAVCHLSLATQLSASTSEQLSAASDQLNAQADQLRRMIAYFRTRAAPA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=289, Percent_Identity=41.1764705882353, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI2367378, Length=262, Percent_Identity=41.9847328244275, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1788194, Length=325, Percent_Identity=34.4615384615385, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1788195, Length=296, Percent_Identity=39.527027027027, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1789453, Length=242, Percent_Identity=34.297520661157, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 32838; Mature: 32838

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAAISAVSLLALAGAIAQIGRGLFRQVGGEPAMVAEVAHRVASGDLTVKLEPRGGDDRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHH
VLAAMQHMVSRLTGVIEQLRLDAEQLNATSSEVSASAQSLSQSASQQAASLEETSASVEQ
HHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAATVSQNSESAHLTDTMASQAALLANCGGEAVSRTVAAIRDISSRIDVIDDIAYQTNLL
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNAAIEAAQAGSHGRGFTVVAAQVRKLAERSQDAAREICALAGGSVDMAEQAGTALGEM
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LPAIRKTAELVQEIALASQEQSEGLQQINTAVCHLSLATQLSASTSEQLSAASDQLNAQA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DQLRRMIAYFRTRAAPA
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFAAISAVSLLALAGAIAQIGRGLFRQVGGEPAMVAEVAHRVASGDLTVKLEPRGGDDRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHH
VLAAMQHMVSRLTGVIEQLRLDAEQLNATSSEVSASAQSLSQSASQQAASLEETSASVEQ
HHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAATVSQNSESAHLTDTMASQAALLANCGGEAVSRTVAAIRDISSRIDVIDDIAYQTNLL
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNAAIEAAQAGSHGRGFTVVAAQVRKLAERSQDAAREICALAGGSVDMAEQAGTALGEM
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LPAIRKTAELVQEIALASQEQSEGLQQINTAVCHLSLATQLSASTSEQLSAASDQLNAQA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DQLRRMIAYFRTRAAPA
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]