| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cbiL [H]
Identifier: 34497020
GI number: 34497020
Start: 1677998
End: 1678726
Strand: Reverse
Name: cbiL [H]
Synonym: CV_1565
Alternate gene names: 34497020
Gene position: 1678726-1677998 (Counterclockwise)
Preceding gene: 34497021
Following gene: 34497019
Centisome position: 35.33
GC content: 65.84
Gene sequence:
>729_bases ATGAAGCTGGGACGATTGATAGGCATAGGCGTCGGCCCCGGCCCGGCCGGCTTGATTCCGGTGGCGGCGCTGGCCGCGCT ACACGAGGCCGACATCGTCTACCTGCCGCGCGCTACCTCCAGCGACACGTCGGTCGCCCGACTATGCCTGGCCGGGCTGG AGCTGGACGAAAGCCGCTTCCGCGAGATCGAGTTTGAAATGAATCCGGACCGCGGCGCGCTGTCGCGCCATTACGGCGCG CTGGCCGAGCGGCTGGCCGCCGAATTGAAAACCGGCCGCAACGTCGCCTACCTGACCATAGGCGACTCGATGACTTATTC GACTTACGGCTACCTGCTGGCGGCGCTGCGCGAAATGCTGCCAGAACTAGAGACGCAGACCTTCCCCGGCGTCACCAGCT TCGCCGCCACCGCGTCGGCGCTGTCCTGGCCGCTGGGCGAAGGCAAGGAACGCATGCTGATCCTACCCTGCCCCGACGAT ATGGCCGAGCTGAGGGCGGATATCGAAAGCCACGACATCGTGGTGCTGATGAAGATAGGCAAGCGGCTGCCCGAGGTGCT GGCGCTGCTGAACCAGATGGGCATCGCCCAGCTGTGCGCCTTCGCCCGCCGCATCGGCCTGCCCGGCGAAGTGCTGTGCG CCGACGTCTCGCAATTGGACGCCGACGCCAGCGGCTACCTCGCCACCATGCTGATCCGCAAGACAGCCAGAGAAAGACGC CACTCATGA
Upstream 100 bases:
>100_bases AACGCCGCACCGCCGCGCGGATGGCCACCAAGGTGCCCAGCGTGCGGCAGGTGGCGGTGCGGCTGTTCAGCATGGACGGC ACCCCGCTGGGAGAGGCCGC
Downstream 100 bases:
>100_bases AAGTGTATTTCATCGGCGCCGGCCCCGGCGCCGCCGACCTGATCACGCTGCGCGGCAGCCGCCTGCTAGGCGCCGCCCCG ATGGTGCTGTACGCCGGCTC
Product: precorrin-2 C20-methyltransferase
Products: NA
Alternate protein names: S-adenosyl-L-methionine--cobalt-precorrin-2 methyltransferase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKLGRLIGIGVGPGPAGLIPVAALAALHEADIVYLPRATSSDTSVARLCLAGLELDESRFREIEFEMNPDRGALSRHYGA LAERLAAELKTGRNVAYLTIGDSMTYSTYGYLLAALREMLPELETQTFPGVTSFAATASALSWPLGEGKERMLILPCPDD MAELRADIESHDIVVLMKIGKRLPEVLALLNQMGIAQLCAFARRIGLPGEVLCADVSQLDADASGYLATMLIRKTARERR HS
Sequences:
>Translated_242_residues MKLGRLIGIGVGPGPAGLIPVAALAALHEADIVYLPRATSSDTSVARLCLAGLELDESRFREIEFEMNPDRGALSRHYGA LAERLAAELKTGRNVAYLTIGDSMTYSTYGYLLAALREMLPELETQTFPGVTSFAATASALSWPLGEGKERMLILPCPDD MAELRADIESHDIVVLMKIGKRLPEVLALLNQMGIAQLCAFARRIGLPGEVLCADVSQLDADASGYLATMLIRKTARERR HS >Mature_242_residues MKLGRLIGIGVGPGPAGLIPVAALAALHEADIVYLPRATSSDTSVARLCLAGLELDESRFREIEFEMNPDRGALSRHYGA LAERLAAELKTGRNVAYLTIGDSMTYSTYGYLLAALREMLPELETQTFPGVTSFAATASALSWPLGEGKERMLILPCPDD MAELRADIESHDIVVLMKIGKRLPEVLALLNQMGIAQLCAFARRIGLPGEVLCADVSQLDADASGYLATMLIRKTARERR HS
Specific function: Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway [H]
COG id: COG2243
COG function: function code H; Precorrin-2 methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012382 - InterPro: IPR006364 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.151 [H]
Molecular weight: Translated: 26170; Mature: 26170
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGRLIGIGVGPGPAGLIPVAALAALHEADIVYLPRATSSDTSVARLCLAGLELDESRF CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCHHHH REIEFEMNPDRGALSRHYGALAERLAAELKTGRNVAYLTIGDSMTYSTYGYLLAALREML HEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH PELETQTFPGVTSFAATASALSWPLGEGKERMLILPCPDDMAELRADIESHDIVVLMKIG HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEHHHHH KRLPEVLALLNQMGIAQLCAFARRIGLPGEVLCADVSQLDADASGYLATMLIRKTARERR HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC HS CC >Mature Secondary Structure MKLGRLIGIGVGPGPAGLIPVAALAALHEADIVYLPRATSSDTSVARLCLAGLELDESRF CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCHHHH REIEFEMNPDRGALSRHYGALAERLAAELKTGRNVAYLTIGDSMTYSTYGYLLAALREML HEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH PELETQTFPGVTSFAATASALSWPLGEGKERMLILPCPDDMAELRADIESHDIVVLMKIG HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEHHHHH KRLPEVLALLNQMGIAQLCAFARRIGLPGEVLCADVSQLDADASGYLATMLIRKTARERR HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC HS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]