Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497007

Identifier: 34497007

GI number: 34497007

Start: 1666194

End: 1666607

Strand: Direct

Name: 34497007

Synonym: CV_1552

Alternate gene names: NA

Gene position: 1666194-1666607 (Clockwise)

Preceding gene: 34497006

Following gene: 34497008

Centisome position: 35.07

GC content: 65.46

Gene sequence:

>414_bases
ATGGCGGGCGTCCCAGGCCGCCCGCCGCGTTTGGCCATGTCTTCCGTTTTCTCCGATTTTTACCGCCATGCCTGGCGCTG
GCGCAGCGGCCGCCAGGGCAGCGGCTACGACAAGATGCTGCTGCTGACCGCGCGCTGGCCCTTGCCGTTCGATTGCTACC
TGATCCGTTATCCGCATGGCTCGGCGATTCCGCCTCATGTGGACCCGGTGGGGAAGGGCCGCCATTATCGGCTCAACCTG
ATCCTCAAGTCGCCGCAGGCCGGCGGCGAATTCGTCTGTGCCGCGCCGCTGTTTTCCAGTCGGCGGATCAAGCTGTTTCG
GCCGGATCTGTGCGAGCACAGCGTGACGCGGGTGGAAGGCGGCAGCCGCTATGTGCTGTCGATAGGCTGGGTGCGGGACG
CGGGCAATTTCTGA

Upstream 100 bases:

>100_bases
CTGGAGCGGGATAAGGCGATGGACTGGTTGGCGACGTGTTGAGCGGTCATCGCCAACCACGCCTTTGTCATGCTAGTCTG
GGCTTTTATCTGTCCTGAGG

Downstream 100 bases:

>100_bases
CGATGGCCGGTTTGCGTGACGCGGAGGGCGCGCTTGCCCGATGCGAACGCGTTCGGCCGAATCTCACAATCTGATGCCGC
GTACCGACGGCGCGGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAGVPGRPPRLAMSSVFSDFYRHAWRWRSGRQGSGYDKMLLLTARWPLPFDCYLIRYPHGSAIPPHVDPVGKGRHYRLNL
ILKSPQAGGEFVCAAPLFSSRRIKLFRPDLCEHSVTRVEGGSRYVLSIGWVRDAGNF

Sequences:

>Translated_137_residues
MAGVPGRPPRLAMSSVFSDFYRHAWRWRSGRQGSGYDKMLLLTARWPLPFDCYLIRYPHGSAIPPHVDPVGKGRHYRLNL
ILKSPQAGGEFVCAAPLFSSRRIKLFRPDLCEHSVTRVEGGSRYVLSIGWVRDAGNF
>Mature_136_residues
AGVPGRPPRLAMSSVFSDFYRHAWRWRSGRQGSGYDKMLLLTARWPLPFDCYLIRYPHGSAIPPHVDPVGKGRHYRLNLI
LKSPQAGGEFVCAAPLFSSRRIKLFRPDLCEHSVTRVEGGSRYVLSIGWVRDAGNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15515; Mature: 15384

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVPGRPPRLAMSSVFSDFYRHAWRWRSGRQGSGYDKMLLLTARWPLPFDCYLIRYPHG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCC
SAIPPHVDPVGKGRHYRLNLILKSPQAGGEFVCAAPLFSSRRIKLFRPDLCEHSVTRVEG
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCCCEEECC
GSRYVLSIGWVRDAGNF
CCEEEEEEEEEECCCCC
>Mature Secondary Structure 
AGVPGRPPRLAMSSVFSDFYRHAWRWRSGRQGSGYDKMLLLTARWPLPFDCYLIRYPHG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCC
SAIPPHVDPVGKGRHYRLNLILKSPQAGGEFVCAAPLFSSRRIKLFRPDLCEHSVTRVEG
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCCCEEECC
GSRYVLSIGWVRDAGNF
CCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA