| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is phoA1 [H]
Identifier: 34496969
GI number: 34496969
Start: 1616777
End: 1618312
Strand: Reverse
Name: phoA1 [H]
Synonym: CV_1514
Alternate gene names: 34496969
Gene position: 1618312-1616777 (Counterclockwise)
Preceding gene: 34496970
Following gene: 34496968
Centisome position: 34.06
GC content: 66.86
Gene sequence:
>1536_bases ATGCCGCCTTATTTTGGCAGAAATGCGCGGAAAATATCATCTGTGCGCATTTTTAATAAAATAAGGTATGTCGTGATGCG CACTTTCACTCTAGGCGCCGGCCTGCTGGCCGCGCTGACGCTCGCCGCGTGCAACAGCGACGGCGGCGGCAACGCCAATC GTCCCCAGGACAATGCGGAAGCCCGCCCGCCGGTCGTCACCACCGCCAAGAACGTCATCTTCTTCCTCGGCGACGGCATG GGCATCGCCACCACCACCGCCGCGCGCATCTACGCCGCCGGCGAGGATGGCGCGCTGACAATGGACACGCTGCCCGAGTC CGGCTTCGTCAAAACCTTCTCCAACGACGCCCAGGTCACCGACAGCGCGCCGTCGATGTCGGCCTACATGACCGGCGTCA AGATGAACAATGAAGTCATCTCCATGTCCACCGACACCGTGGCCAAAGCGCCGACCGCCGACCTGACCTCCGGCTGCGGC GCCGGCAACGGCAAGCCGGTGTCCACGCTGCTGGAGCTGGCCAAGGCCGGCAACCGCGCCACCGGCGTGGTCACCACCAC CCGCGTCACCCACGCCACCCCGGCCGCCACCTATGCCCACGTCTGCCACCGCGACGCCGAAGCCGACATCGCCGCCCAGC TGGTGCCGGGCGGCGCGCTGTACAACGCCGCGCTGAAGGACGGCGTGGACGTGGTGTTCGGCGGCGGCCGCCAGTTCTTC CTGCCCAAGACGGCAGGCGGCAAGCGCGCCGACGGCCGCGACCTGGTGGCGGAGCTGAAGGCCAAGGGCTATGGCTACGC CGCCGACAAGGCCGCGTTCAGCGCCATCGACCCGGCCAAGACCCAGCGCGCGGTCGGCCTGTTCACCTCCAGCCACATGA GCTACGACCTGGACCGCGACCCGAACAAGGAGCCCAGCCTGGCCGAGATGACCACCAAGGCCATCGACCTGCTGGCGAAT CGCAGCGGCAAGCAAGGCATGTTCCTGATGGTGGAAGGCGGCCGCATCGACCACGCGCTGCACGAAACCACCGCCAAGAA GGCGCTGCAGGACACCGTGGCCTTCGACCAGGCGATCAAGGCCGCCATCGACGCGATGCAGCAGAAGGACCCCGGCCTGA AGAACACGCTGATCGTCGTCACCGCCGACCATGACCATACCCTGGTGCTCAACGGCTATGCCAAGCGCACCGGCAAGACC GCGCCGGGCAATCCCGGCGTGCTGGGCCTGGCCAAGGACTACGTCAGCGGCAAGAACCTGACCGACGCCGACGGCATGCC CTACTCCATCATCGGCTTCGGCAACGGCGAAAACCGCGTCGCCGGCAACCGCAACGCGGCGGCGGCGCTGACCGACGACG CCGTCTCGGCCAACGACTACCACCAGGAAGCGGCGATACGGATGCCGACCGGCGGCGAAACCCACGGCGGCACCGATGTC TACATCGGCGCCATCGGCCAGGGCGCCGACAGCATCCACGGCTTTCTGGAAAACATAGAAGTGTTCGGCCTGGTCAAGAA GGCCGCCGGCCTGTGA
Upstream 100 bases:
>100_bases AAGGTCGCCGCGCCCTGCCATGCCGGCGAGGCCAAGGTGCGGGTGTCCTTCCTCGCCCACCTGTGGAAGTGCTGAGCAAC GCGTTCGTCATAAAATCTTA
Downstream 100 bases:
>100_bases TGGAGAACGACAAGATGAAAACCGCGATGAACACCCTGCTGGCCGCCGCCGCGCTGGCCGCGCTGCCGGCCCTGCCCGCC CACGCCGCCGGCGAGGCCAA
Product: alkaline phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MPPYFGRNARKISSVRIFNKIRYVVMRTFTLGAGLLAALTLAACNSDGGGNANRPQDNAEARPPVVTTAKNVIFFLGDGM GIATTTAARIYAAGEDGALTMDTLPESGFVKTFSNDAQVTDSAPSMSAYMTGVKMNNEVISMSTDTVAKAPTADLTSGCG AGNGKPVSTLLELAKAGNRATGVVTTTRVTHATPAATYAHVCHRDAEADIAAQLVPGGALYNAALKDGVDVVFGGGRQFF LPKTAGGKRADGRDLVAELKAKGYGYAADKAAFSAIDPAKTQRAVGLFTSSHMSYDLDRDPNKEPSLAEMTTKAIDLLAN RSGKQGMFLMVEGGRIDHALHETTAKKALQDTVAFDQAIKAAIDAMQQKDPGLKNTLIVVTADHDHTLVLNGYAKRTGKT APGNPGVLGLAKDYVSGKNLTDADGMPYSIIGFGNGENRVAGNRNAAAALTDDAVSANDYHQEAAIRMPTGGETHGGTDV YIGAIGQGADSIHGFLENIEVFGLVKKAAGL
Sequences:
>Translated_511_residues MPPYFGRNARKISSVRIFNKIRYVVMRTFTLGAGLLAALTLAACNSDGGGNANRPQDNAEARPPVVTTAKNVIFFLGDGM GIATTTAARIYAAGEDGALTMDTLPESGFVKTFSNDAQVTDSAPSMSAYMTGVKMNNEVISMSTDTVAKAPTADLTSGCG AGNGKPVSTLLELAKAGNRATGVVTTTRVTHATPAATYAHVCHRDAEADIAAQLVPGGALYNAALKDGVDVVFGGGRQFF LPKTAGGKRADGRDLVAELKAKGYGYAADKAAFSAIDPAKTQRAVGLFTSSHMSYDLDRDPNKEPSLAEMTTKAIDLLAN RSGKQGMFLMVEGGRIDHALHETTAKKALQDTVAFDQAIKAAIDAMQQKDPGLKNTLIVVTADHDHTLVLNGYAKRTGKT APGNPGVLGLAKDYVSGKNLTDADGMPYSIIGFGNGENRVAGNRNAAAALTDDAVSANDYHQEAAIRMPTGGETHGGTDV YIGAIGQGADSIHGFLENIEVFGLVKKAAGL >Mature_510_residues PPYFGRNARKISSVRIFNKIRYVVMRTFTLGAGLLAALTLAACNSDGGGNANRPQDNAEARPPVVTTAKNVIFFLGDGMG IATTTAARIYAAGEDGALTMDTLPESGFVKTFSNDAQVTDSAPSMSAYMTGVKMNNEVISMSTDTVAKAPTADLTSGCGA GNGKPVSTLLELAKAGNRATGVVTTTRVTHATPAATYAHVCHRDAEADIAAQLVPGGALYNAALKDGVDVVFGGGRQFFL PKTAGGKRADGRDLVAELKAKGYGYAADKAAFSAIDPAKTQRAVGLFTSSHMSYDLDRDPNKEPSLAEMTTKAIDLLANR SGKQGMFLMVEGGRIDHALHETTAKKALQDTVAFDQAIKAAIDAMQQKDPGLKNTLIVVTADHDHTLVLNGYAKRTGKTA PGNPGVLGLAKDYVSGKNLTDADGMPYSIIGFGNGENRVAGNRNAAAALTDDAVSANDYHQEAAIRMPTGGETHGGTDVY IGAIGQGADSIHGFLENIEVFGLVKKAAGL
Specific function: Specifically cleaves both streptomycin-6-phosphate and, more slowly, streptomycin-3''-phosphate during the biosynthesis of streptomycin [H]
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=480, Percent_Identity=37.0833333333333, Blast_Score=252, Evalue=7e-67, Organism=Homo sapiens, GI294660770, Length=475, Percent_Identity=36.4210526315789, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI157266296, Length=474, Percent_Identity=35.8649789029536, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI157266292, Length=490, Percent_Identity=34.6938775510204, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI94721246, Length=474, Percent_Identity=35.6540084388186, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI294660772, Length=443, Percent_Identity=34.7629796839729, Blast_Score=209, Evalue=4e-54, Organism=Escherichia coli, GI48994877, Length=356, Percent_Identity=32.8651685393258, Blast_Score=140, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6320689, Length=339, Percent_Identity=32.7433628318584, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI85725200, Length=451, Percent_Identity=35.0332594235033, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI85815833, Length=451, Percent_Identity=35.0332594235033, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI21355151, Length=456, Percent_Identity=37.0614035087719, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI21358067, Length=499, Percent_Identity=35.2705410821643, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI19921912, Length=488, Percent_Identity=34.2213114754098, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI21355981, Length=467, Percent_Identity=33.6188436830835, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24585213, Length=466, Percent_Identity=33.4763948497854, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI21355149, Length=446, Percent_Identity=33.4080717488789, Blast_Score=209, Evalue=5e-54, Organism=Drosophila melanogaster, GI18859923, Length=452, Percent_Identity=35.3982300884956, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24651554, Length=485, Percent_Identity=34.2268041237113, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI24657827, Length=478, Percent_Identity=33.6820083682008, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24651556, Length=473, Percent_Identity=33.615221987315, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24657835, Length=494, Percent_Identity=31.7813765182186, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24657842, Length=495, Percent_Identity=30.1010101010101, Blast_Score=179, Evalue=4e-45,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.39 [H]
Molecular weight: Translated: 53208; Mature: 53076
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPYFGRNARKISSVRIFNKIRYVVMRTFTLGAGLLAALTLAACNSDGGGNANRPQDNAE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ARPPVVTTAKNVIFFLGDGMGIATTTAARIYAAGEDGALTMDTLPESGFVKTFSNDAQVT CCCCEEEECCEEEEEEECCCCEEEECEEEEEEECCCCEEECCCCCCCCCEEEECCCCEEC DSAPSMSAYMTGVKMNNEVISMSTDTVAKAPTADLTSGCGAGNGKPVSTLLELAKAGNRA CCCCCCCHHEEEEEECCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCC TGVVTTTRVTHATPAATYAHVCHRDAEADIAAQLVPGGALYNAALKDGVDVVFGGGRQFF CEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCEEEECCCEEEE LPKTAGGKRADGRDLVAELKAKGYGYAADKAAFSAIDPAKTQRAVGLFTSSHMSYDLDRD EECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHEEEECCCCEEECCCC PNKEPSLAEMTTKAIDLLANRSGKQGMFLMVEGGRIDHALHETTAKKALQDTVAFDQAIK CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH AAIDAMQQKDPGLKNTLIVVTADHDHTLVLNGYAKRTGKTAPGNPGVLGLAKDYVSGKNL HHHHHHHHCCCCCCCEEEEEECCCCCEEEEECHHHHCCCCCCCCCCEEEEHHHHCCCCCC TDADGMPYSIIGFGNGENRVAGNRNAAAALTDDAVSANDYHQEAAIRMPTGGETHGGTDV CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCHHCCCEEECCCCCCCCCCCEE YIGAIGQGADSIHGFLENIEVFGLVKKAAGL EEEECCCCHHHHHHHHHHHHHEEHHHHHCCC >Mature Secondary Structure PPYFGRNARKISSVRIFNKIRYVVMRTFTLGAGLLAALTLAACNSDGGGNANRPQDNAE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ARPPVVTTAKNVIFFLGDGMGIATTTAARIYAAGEDGALTMDTLPESGFVKTFSNDAQVT CCCCEEEECCEEEEEEECCCCEEEECEEEEEEECCCCEEECCCCCCCCCEEEECCCCEEC DSAPSMSAYMTGVKMNNEVISMSTDTVAKAPTADLTSGCGAGNGKPVSTLLELAKAGNRA CCCCCCCHHEEEEEECCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCC TGVVTTTRVTHATPAATYAHVCHRDAEADIAAQLVPGGALYNAALKDGVDVVFGGGRQFF CEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCEEEECCCEEEE LPKTAGGKRADGRDLVAELKAKGYGYAADKAAFSAIDPAKTQRAVGLFTSSHMSYDLDRD EECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHEEEECCCCEEECCCC PNKEPSLAEMTTKAIDLLANRSGKQGMFLMVEGGRIDHALHETTAKKALQDTVAFDQAIK CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH AAIDAMQQKDPGLKNTLIVVTADHDHTLVLNGYAKRTGKTAPGNPGVLGLAKDYVSGKNL HHHHHHHHCCCCCCCEEEEEECCCCCEEEEECHHHHCCCCCCCCCCEEEEHHHHCCCCCC TDADGMPYSIIGFGNGENRVAGNRNAAAALTDDAVSANDYHQEAAIRMPTGGETHGGTDV CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCHHCCCEEECCCCCCCCCCCEE YIGAIGQGADSIHGFLENIEVFGLVKKAAGL EEEECCCCHHHHHHHHHHHHHEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1654502 [H]