Click here to switch to the map view.

The map label for this gene is hxuB [H]

Identifier: 34496923

GI number: 34496923

Start: 1559313

End: 1561055

Strand: Reverse

Name: hxuB [H]

Synonym: CV_1468

Alternate gene names: 34496923

Gene position: 1561055-1559313 (Counterclockwise)

Preceding gene: 34496924

Following gene: 34496914

Centisome position: 32.86

GC content: 48.82

Gene sequence:

>1743_bases
ATGACATCACGCTCGAAACCATATTTCTTGGCAAAAACAAAATCCAGCAATATGCATCCCAGGAAATCAGGCACACTCCA
TTCTGTCCACATGATAAGTTATGCTCTATTGGCAATTTGGACGGTGCAGGCGGGTGCAGCCAATCCATCTGTCAATATCG
ACAGCGGTCAACTCTTGCAAGAACTGAAGCGTCCCAAGCCAACCACCCCGATCAAAGACACCCCGCTCACCACTGAGCTT
CCTGTTGACGTTACAAAACAGAGTGGGGGCACATTGCTAGTACAAGACATCGTACTGGAAGGAAATACGGTTTTTGATAA
TAAAACTCTTCTTGAATTAGTGGCGGACGCCAAGGGCAAGGAATTAAATTTAGATCAGCTAAAAGAATTAGCCACGAGAA
TTACGCACTATTATCAACAACATGGCTACCCAATCTCATTAGCTTATATCCCAGCGCAAACACCAAGCGATGGTACGGTA
AAAATCAATATCATTGAAACTCGCTTTGGGGAAATCACGATAAACAACCAAAGCAGCGTCAAAGACAAGGCTTTACTAGC
TAATCTAAAGCCATTGCAAAGTGGTGACCTGGTCCGCGAAGACCCGTTGCAACGCAGCTTATTATTACTAAGCGACACCC
CTGGCATTGCAGTGCACAGCGTATTGCGCCCGGGGGCAAACCCGGGAACCTCAGACCTGCAGGTCAGCGCGCAAGCCGGA
GCGAAATTCGCCGGCAGCGTACTGCTTGACAACACCGGCAATACTTACACTGGCCGTCTTCGCCTCGGAGGGACGCTGCA
GATCAACAACCCGCTCAACCAAGGCGATCAATTGGTGGTGAACGGTTTGACCAGCTCTGGACTAAGCTATGGGCGCGTCG
ATTATCAATTCCCACTGGCAGGACAAGCGACATTACTGGGTGGAGCCGCTTCTTACCTGGACTATAAATTGCAGAACGAC
TTTTCCAATCTAGGCGCACATGGAAATGCCAGCGAAGCTGATTTATGGCTTTCCCATTTTTTCGTTCGAAGCGTAAATGG
CTCTCTCATCGGCCGCCTGACCGTCAATCAAAAAAACCTAGATGACAATATAGATTCGAATCAATCGAATAAAAACAGGC
GGACAAATAATGTCATTGTAGAGCTTTCAGGCGATCGACTCGACAGCCATGGCATCAGCAACATGCGCCTAGCCCTTACC
AGCGGCGAATTGAAATTCCGCAATGAAGCCGCCAATCTATTAGATACGGAAAGCGCCAAAACGGCTGGTCATTTTTTCAA
AAGCACATTAAGCTTGGCTCGCCTGCAACGCCTGACCAACAGCAGCGCGCTTTATTTATCCATCACCGGACAGCTGGCCA
ATAAAAACCTCGACTCCTCAGAACAATTTGTTCTAGGTGGATTTAACAATATACGCGCCTATGAATCAGGGGCTGCCGCG
GGAGCGGAAGGTTATGCCGCCACGGTAGAATTACGCCAAAATTTTTCTCTGCCGGCACCTGGCACATGGCAAGGCATTGC
CTTCATCGACTCCGGCCGAGTTCAGCTATACAAGAATGCATTTGCCTCCGGTGAGAATTCCGCTACGCTATCCGGGGTAG
GCATTGGCCTGAATTGGAGCGGAGGGCAAGGTTGGAACCTGTCATCGATACTGGCAAAGAAAATAGGCAGTTCCCCGCCA
GCATCCATCGTCAGCAATCAAAAACGGGCATTATTCTGGCTACAGTTGAACAAACAGTTTTGA

Upstream 100 bases:

>100_bases
CTGGCCTGTCAGGTTTTGAAACCGTATTGAACCTCGATGTAATTGACGGCGGCGTTAAATTGTCAACAGACCGTAAAACT
CTTGGCGGGGGTAACTAGCC

Downstream 100 bases:

>100_bases
ATCCGGCATGACAACGCCGAGTCCCCGCTACGGGACTCGGCGTTGCGTTTGATGCTTACTTTCGCGACAAAACCGTGATC
CGCTCCTTAAGGCCACACCA

Product: activation/secretion signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MTSRSKPYFLAKTKSSNMHPRKSGTLHSVHMISYALLAIWTVQAGAANPSVNIDSGQLLQELKRPKPTTPIKDTPLTTEL
PVDVTKQSGGTLLVQDIVLEGNTVFDNKTLLELVADAKGKELNLDQLKELATRITHYYQQHGYPISLAYIPAQTPSDGTV
KINIIETRFGEITINNQSSVKDKALLANLKPLQSGDLVREDPLQRSLLLLSDTPGIAVHSVLRPGANPGTSDLQVSAQAG
AKFAGSVLLDNTGNTYTGRLRLGGTLQINNPLNQGDQLVVNGLTSSGLSYGRVDYQFPLAGQATLLGGAASYLDYKLQND
FSNLGAHGNASEADLWLSHFFVRSVNGSLIGRLTVNQKNLDDNIDSNQSNKNRRTNNVIVELSGDRLDSHGISNMRLALT
SGELKFRNEAANLLDTESAKTAGHFFKSTLSLARLQRLTNSSALYLSITGQLANKNLDSSEQFVLGGFNNIRAYESGAAA
GAEGYAATVELRQNFSLPAPGTWQGIAFIDSGRVQLYKNAFASGENSATLSGVGIGLNWSGGQGWNLSSILAKKIGSSPP
ASIVSNQKRALFWLQLNKQF

Sequences:

>Translated_580_residues
MTSRSKPYFLAKTKSSNMHPRKSGTLHSVHMISYALLAIWTVQAGAANPSVNIDSGQLLQELKRPKPTTPIKDTPLTTEL
PVDVTKQSGGTLLVQDIVLEGNTVFDNKTLLELVADAKGKELNLDQLKELATRITHYYQQHGYPISLAYIPAQTPSDGTV
KINIIETRFGEITINNQSSVKDKALLANLKPLQSGDLVREDPLQRSLLLLSDTPGIAVHSVLRPGANPGTSDLQVSAQAG
AKFAGSVLLDNTGNTYTGRLRLGGTLQINNPLNQGDQLVVNGLTSSGLSYGRVDYQFPLAGQATLLGGAASYLDYKLQND
FSNLGAHGNASEADLWLSHFFVRSVNGSLIGRLTVNQKNLDDNIDSNQSNKNRRTNNVIVELSGDRLDSHGISNMRLALT
SGELKFRNEAANLLDTESAKTAGHFFKSTLSLARLQRLTNSSALYLSITGQLANKNLDSSEQFVLGGFNNIRAYESGAAA
GAEGYAATVELRQNFSLPAPGTWQGIAFIDSGRVQLYKNAFASGENSATLSGVGIGLNWSGGQGWNLSSILAKKIGSSPP
ASIVSNQKRALFWLQLNKQF
>Mature_579_residues
TSRSKPYFLAKTKSSNMHPRKSGTLHSVHMISYALLAIWTVQAGAANPSVNIDSGQLLQELKRPKPTTPIKDTPLTTELP
VDVTKQSGGTLLVQDIVLEGNTVFDNKTLLELVADAKGKELNLDQLKELATRITHYYQQHGYPISLAYIPAQTPSDGTVK
INIIETRFGEITINNQSSVKDKALLANLKPLQSGDLVREDPLQRSLLLLSDTPGIAVHSVLRPGANPGTSDLQVSAQAGA
KFAGSVLLDNTGNTYTGRLRLGGTLQINNPLNQGDQLVVNGLTSSGLSYGRVDYQFPLAGQATLLGGAASYLDYKLQNDF
SNLGAHGNASEADLWLSHFFVRSVNGSLIGRLTVNQKNLDDNIDSNQSNKNRRTNNVIVELSGDRLDSHGISNMRLALTS
GELKFRNEAANLLDTESAKTAGHFFKSTLSLARLQRLTNSSALYLSITGQLANKNLDSSEQFVLGGFNNIRAYESGAAAG
AEGYAATVELRQNFSLPAPGTWQGIAFIDSGRVQLYKNAFASGENSATLSGVGIGLNWSGGQGWNLSSILAKKIGSSPPA
SIVSNQKRALFWLQLNKQF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 62424; Mature: 62293

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRSKPYFLAKTKSSNMHPRKSGTLHSVHMISYALLAIWTVQAGAANPSVNIDSGQLLQ
CCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHEEECCCCCCCEECCHHHHHH
ELKRPKPTTPIKDTPLTTELPVDVTKQSGGTLLVQDIVLEGNTVFDNKTLLELVADAKGK
HHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCEEECCHHHHHHHHCCCCC
ELNLDQLKELATRITHYYQQHGYPISLAYIPAQTPSDGTVKINIIETRFGEITINNQSSV
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEEEECCEEEECCCCCC
KDKALLANLKPLQSGDLVREDPLQRSLLLLSDTPGIAVHSVLRPGANPGTSDLQVSAQAG
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCEEEECCCC
AKFAGSVLLDNTGNTYTGRLRLGGTLQINNPLNQGDQLVVNGLTSSGLSYGRVDYQFPLA
CCEECEEEEECCCCEEEEEEEECCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCC
GQATLLGGAASYLDYKLQNDFSNLGAHGNASEADLWLSHFFVRSVNGSLIGRLTVNQKNL
CCEEEECCHHHHHEEHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
DDNIDSNQSNKNRRTNNVIVELSGDRLDSHGISNMRLALTSGELKFRNEAANLLDTESAK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEECCHHHHHHCCCCCH
TAGHFFKSTLSLARLQRLTNSSALYLSITGQLANKNLDSSEQFVLGGFNNIRAYESGAAA
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCCCCEEEECCCCCEEECCCCCC
GAEGYAATVELRQNFSLPAPGTWQGIAFIDSGRVQLYKNAFASGENSATLSGVGIGLNWS
CCCCCEEEEEEHHCCCCCCCCCCCEEEEEECCCEEEEEHHHCCCCCCEEEEEEEEEEECC
GGQGWNLSSILAKKIGSSPPASIVSNQKRALFWLQLNKQF
CCCCCCHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCC
>Mature Secondary Structure 
TSRSKPYFLAKTKSSNMHPRKSGTLHSVHMISYALLAIWTVQAGAANPSVNIDSGQLLQ
CCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHEEECCCCCCCEECCHHHHHH
ELKRPKPTTPIKDTPLTTELPVDVTKQSGGTLLVQDIVLEGNTVFDNKTLLELVADAKGK
HHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCEEECCHHHHHHHHCCCCC
ELNLDQLKELATRITHYYQQHGYPISLAYIPAQTPSDGTVKINIIETRFGEITINNQSSV
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEEEECCEEEECCCCCC
KDKALLANLKPLQSGDLVREDPLQRSLLLLSDTPGIAVHSVLRPGANPGTSDLQVSAQAG
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCEEEECCCC
AKFAGSVLLDNTGNTYTGRLRLGGTLQINNPLNQGDQLVVNGLTSSGLSYGRVDYQFPLA
CCEECEEEEECCCCEEEEEEEECCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCC
GQATLLGGAASYLDYKLQNDFSNLGAHGNASEADLWLSHFFVRSVNGSLIGRLTVNQKNL
CCEEEECCHHHHHEEHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
DDNIDSNQSNKNRRTNNVIVELSGDRLDSHGISNMRLALTSGELKFRNEAANLLDTESAK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEECCHHHHHHCCCCCH
TAGHFFKSTLSLARLQRLTNSSALYLSITGQLANKNLDSSEQFVLGGFNNIRAYESGAAA
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCCCCEEEECCCCCEEECCCCCC
GAEGYAATVELRQNFSLPAPGTWQGIAFIDSGRVQLYKNAFASGENSATLSGVGIGLNWS
CCCCCEEEEEEHHCCCCCCCCCCCEEEEEECCCEEEEEHHHCCCCCCEEEEEEEEEEECC
GGQGWNLSSILAKKIGSSPPASIVSNQKRALFWLQLNKQF
CCCCCCHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]