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The map label for this gene is rimP

Identifier: 34496915

GI number: 34496915

Start: 1548998

End: 1549423

Strand: Direct

Name: rimP

Synonym: CV_1460

Alternate gene names: 34496915

Gene position: 1548998-1549423 (Clockwise)

Preceding gene: 34496908

Following gene: 34496916

Centisome position: 32.6

GC content: 57.04

Gene sequence:

>426_bases
ATGGATGTTCGTTTGCTGCTGGAAAACACCCTGCCGGGTCTGGGCTATGAGCTCGTCGATTTCGAAATGACCCCCGGTGG
CGGTTTCCGCGTGTTTATCGACAAGCCCGGTGGCATCACCGTGGAAGACTGCGTGCTGGTGAGCAATCACTTCACGCGGC
TGTTCATGGTCGAAAACGTGGATTACGAGCGTTTGGAAGTGTCTTCTCCGGGCCTGGATCGCCCGTTGAAGAAGGAGGCC
GATTTTGTCCGCTTCTCCGGTCAGCTCGCCAAGATCAAGACGCGGATGCCGATCGAGCAGCAGAAGAAATTTACCGGTCG
TCTTGCCGGGGTCGAGGATGGCTCCGTGAAGCTGGATGTGGATGGCCGCATCGTGGAGATTCCGTTCGCCAACATCGACA
AGGCTCGTCTCGAGCCTGAGTTTTGA

Upstream 100 bases:

>100_bases
GGAGGTCCGGCCGGGCCGGTTTTCTTTTTTGCGGAAATAGGTTACAATCGCAGCGGTTAGGGATGGGCGTTTCGCCCATT
TTTTATTTGTGGAAAAAGCA

Downstream 100 bases:

>100_bases
TGTCTGGACGGCTTTTAGCCCACGCTAAAGGACAAAATTCGGAGAGGAATGCATGAGTCGCGAGATTTTGTTGCTGGTGG
ATGCCCTGGCGAGCGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MDVRLLLENTLPGLGYELVDFEMTPGGGFRVFIDKPGGITVEDCVLVSNHFTRLFMVENVDYERLEVSSPGLDRPLKKEA
DFVRFSGQLAKIKTRMPIEQQKKFTGRLAGVEDGSVKLDVDGRIVEIPFANIDKARLEPEF

Sequences:

>Translated_141_residues
MDVRLLLENTLPGLGYELVDFEMTPGGGFRVFIDKPGGITVEDCVLVSNHFTRLFMVENVDYERLEVSSPGLDRPLKKEA
DFVRFSGQLAKIKTRMPIEQQKKFTGRLAGVEDGSVKLDVDGRIVEIPFANIDKARLEPEF
>Mature_141_residues
MDVRLLLENTLPGLGYELVDFEMTPGGGFRVFIDKPGGITVEDCVLVSNHFTRLFMVENVDYERLEVSSPGLDRPLKKEA
DFVRFSGQLAKIKTRMPIEQQKKFTGRLAGVEDGSVKLDVDGRIVEIPFANIDKARLEPEF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=134, Percent_Identity=37.3134328358209, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_CHRVO (Q7NY15)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901130.1
- ProteinModelPortal:   Q7NY15
- SMR:   Q7NY15
- GeneID:   2550391
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_1460
- NMPDR:   fig|243365.1.peg.1460
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   Q7NY15
- ProtClustDB:   PRK00092
- BioCyc:   CVIO243365:CV_1460-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 15876; Mature: 15876

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRLLLENTLPGLGYELVDFEMTPGGGFRVFIDKPGGITVEDCVLVSNHFTRLFMVENV
CCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHEEEECCCCEEEEEEECC
DYERLEVSSPGLDRPLKKEADFVRFSGQLAKIKTRMPIEQQKKFTGRLAGVEDGSVKLDV
CCEEEEECCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHCEECCCCCCCEEEEE
DGRIVEIPFANIDKARLEPEF
CCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDVRLLLENTLPGLGYELVDFEMTPGGGFRVFIDKPGGITVEDCVLVSNHFTRLFMVENV
CCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHEEEECCCCEEEEEEECC
DYERLEVSSPGLDRPLKKEADFVRFSGQLAKIKTRMPIEQQKKFTGRLAGVEDGSVKLDV
CCEEEEECCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHCEECCCCCCCEEEEE
DGRIVEIPFANIDKARLEPEF
CCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782