| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496905
Identifier: 34496905
GI number: 34496905
Start: 1537814
End: 1538200
Strand: Direct
Name: 34496905
Synonym: CV_1450
Alternate gene names: NA
Gene position: 1537814-1538200 (Clockwise)
Preceding gene: 34496903
Following gene: 34496908
Centisome position: 32.37
GC content: 62.02
Gene sequence:
>387_bases ATGCACAAAAGCCGCCTGAGCAACATCATCATCGACTGCAGGACCGACGACATAGAGGGCGCGGCCAGGTTTTGGTCCGC GGCGATCGGGCGTACTGCACGCGCTGCAGACGCCGCTGACCCCTATCGCCTGCTCGAAGGACCGCCGGATGAGATGAAGA TTCTGGTCCAGGCAGTGGGTCACGCGAGTCGCGTCCATCTGGACATCGAGACCAACGACGTCGAGGCGGAAGTGGCGCGC CTCGAAAGTCTTGGAGCAAAGCGGGTCGAGAAAATCCACACGTGGTGGGTTATGGAGGCGCCCACGGGACAACGCTTTTG TGTCGTGAGGCCGCAGCGGCCGGATTTTGAGGAACGGGCCAATGTTTGGCAGCGCGGCGACGCCTAA
Upstream 100 bases:
>100_bases GCGGCGCTGCTGCCATCATTTTTTATCTATCAGCCGCCACAACGCGGCTGCCGCTGCCCACCATCTGTCCAGCGTCGTCC GCCTACGGGAGAGAGCCGCA
Downstream 100 bases:
>100_bases CCCTTGGCCCAGCTCAAAACTGAGGCCGCATGAACACCATGTCCCATGCGGCCCACCGGTGGGCTGAAGGGGCTTCAGTC CTGCTTGGCCAGGCTTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MHKSRLSNIIIDCRTDDIEGAARFWSAAIGRTARAADAADPYRLLEGPPDEMKILVQAVGHASRVHLDIETNDVEAEVAR LESLGAKRVEKIHTWWVMEAPTGQRFCVVRPQRPDFEERANVWQRGDA
Sequences:
>Translated_128_residues MHKSRLSNIIIDCRTDDIEGAARFWSAAIGRTARAADAADPYRLLEGPPDEMKILVQAVGHASRVHLDIETNDVEAEVAR LESLGAKRVEKIHTWWVMEAPTGQRFCVVRPQRPDFEERANVWQRGDA >Mature_128_residues MHKSRLSNIIIDCRTDDIEGAARFWSAAIGRTARAADAADPYRLLEGPPDEMKILVQAVGHASRVHLDIETNDVEAEVAR LESLGAKRVEKIHTWWVMEAPTGQRFCVVRPQRPDFEERANVWQRGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14461; Mature: 14461
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKSRLSNIIIDCRTDDIEGAARFWSAAIGRTARAADAADPYRLLEGPPDEMKILVQAVG CCCHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHC HASRVHLDIETNDVEAEVARLESLGAKRVEKIHTWWVMEAPTGQRFCVVRPQRPDFEERA CCEEEEEEEECCCHHHHHHHHHHHCHHHHHHHHHEEEEECCCCCEEEEECCCCCCHHHHH NVWQRGDA HHHCCCCC >Mature Secondary Structure MHKSRLSNIIIDCRTDDIEGAARFWSAAIGRTARAADAADPYRLLEGPPDEMKILVQAVG CCCHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHC HASRVHLDIETNDVEAEVARLESLGAKRVEKIHTWWVMEAPTGQRFCVVRPQRPDFEERA CCEEEEEEEECCCHHHHHHHHHHHCHHHHHHHHHEEEEECCCCCEEEEECCCCCCHHHHH NVWQRGDA HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA