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The map label for this gene is nahY [C]

Identifier: 34496872

GI number: 34496872

Start: 1494564

End: 1496213

Strand: Direct

Name: nahY [C]

Synonym: CV_1417

Alternate gene names: 34496872

Gene position: 1494564-1496213 (Clockwise)

Preceding gene: 34496871

Following gene: 34496881

Centisome position: 31.46

GC content: 65.88

Gene sequence:

>1650_bases
GTGATCTCATTTCTCGCCCAATTCAGCATCCGCGCCAAGATCTTCGGCCTGATCGTGCTTGGCGTGCTGGCGGCGCTGAT
CATAGGCTTCAACGGCATTTCCGGCGCTTCCAGCATGTTCGATCTGACCCGCGACATGCACGACAACGCGCTCAAGCCGG
TCTACCTGCTGGGGCAGGCCGCCAAGCAGGCGGCTTACGTCAACCGCGCCGATTACCGCTACATCGCCGAGAGCGAGAAG
AAGGAGATGGACCAGGTGCAGGTCAATCGCGACAAGTTCTCCGCCGCGATGAAAGGTTTTCTCGACCAATACCGCCAGAC
CCAGCTGACGCCGCCGGAGGTAGACGGCCTGAAGCGCTTCGACGCCGCCTGGGCGGCGATGGAGGGGCCGTGCAAGCAGG
TGCGCGACCTCAGCTACACCGATACCGGCAACGGCGAGAATAACAAGAAGGCGCTGGCCATCATGTCCAAGCAGTGCCGG
CCTTTGTTTCAGGCGGCCGATGATGTGCTGACCGAGCTGTCCAATATCAACATCAAGCTGGCTGACAAGTCTCTGGAGGA
TGCGCAGGGCAAGTACCAGGCGCTGCGCACCATGTCGATCACGGTGTTGGTGGTTGGCCTGGTGGTGCTGACCGCGCTGG
GCCTGGCGATCCAGAACGGCATCATCGGCAGCCTGAAGGAGGCCTGCCGGGCGATGGAGAAAATGGGCGGCGGCGACCTG
ACCGGGGACATCAAGGCGCAGGGCAGGGACGAGGTGGCGGACATGATGCGCTCTCTGTCCGATACCCAGATCCGGCTGCG
CAACACCGTGGGCGAGATCATCCGTTCGGCGGCCAGCGTGGCGGCCACCTCCGAGCAACTGGCCGCCTCCACCGAGCAGG
TCAGCGCCAGCATCGGCCAGCAGGTGAACGCCACCTCCAGCGCCGCGGCGTCGATCGAGGAGCTGACGGTCAGCATAGAC
CTGTGCGCCAGCAATGCCGGCCAGGCCAACGAGCAGGCGGCGGAAGCCGGCCAGCAGGCCAAGGCCGGCAACAAGGACGT
GCAGGATTCCACCACCCGGGTGAAGCGCGTCAACGAGAGCGTGACCAGCTCGGCCGACAGCCTGGAGTCGCTGTCCGACC
AGGCGCAGCAGATCGGCAGCATCGCCACCGTGATCAAGGACGTGGCCGATCAGACCAACCTCTTGGCGCTGAACGCGGCG
ATCGAGGCGGCGCGGGCCGGCGAACAGGGCCGCGGCTTCGCGGTGGTGGCGGACGAGGTGCGCAAGCTGGCGGAGCGCAC
CACCAGTTCGGCGCAGGAAATCACCAATATGATAGGCAAGATCCAGGACGGTGCGCGCGAGGCGGTGGACGGCATGCGCA
GCAGCCGCCAGATCGTGGCCGACGTGGTGGTGGCGGCCGAGAACGCGTCGGCCACCATCAGCACGGTGGAGGAGCGCGCC
GCCGGCGTGGTGTCGGTGATCAACGAGATCGCGCTGGCGGTGGGCGAGCAGCGCCAGGCCAGCACCGAGCTGGCGGGGCG
GGTGGAAGCCATCGCCCAGATGTCCAAGGAAAACGGCATCGCGGTGGACGTGTTTTCGCAGGCCACGCGCGAGCTGGCGA
TGGTGGCGGAGAAGCTGCAGCAGACCACGCTGGCGTTCCGGATGGAGTGA

Upstream 100 bases:

>100_bases
CGGCGCCTATGTTGACAATTTTATCGAATCATGTCTGGTGATTGGTTTTAGTCTGAACTAAAACGCTATGTGTAACTACC
TAAGCAGTAGGGAGCATAGC

Downstream 100 bases:

>100_bases
GGACGCGGCTTAGTTTCCGCCGCGCGGCTGACGCTGTGCCGCGCCGGGGCGGGAAGCGCAAGAAGGGGATGCCGGCATGG
CCGTCATCCCCTTCTTACTG

Product: methyl-accepting chemotaxis transducer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MISFLAQFSIRAKIFGLIVLGVLAALIIGFNGISGASSMFDLTRDMHDNALKPVYLLGQAAKQAAYVNRADYRYIAESEK
KEMDQVQVNRDKFSAAMKGFLDQYRQTQLTPPEVDGLKRFDAAWAAMEGPCKQVRDLSYTDTGNGENNKKALAIMSKQCR
PLFQAADDVLTELSNINIKLADKSLEDAQGKYQALRTMSITVLVVGLVVLTALGLAIQNGIIGSLKEACRAMEKMGGGDL
TGDIKAQGRDEVADMMRSLSDTQIRLRNTVGEIIRSAASVAATSEQLAASTEQVSASIGQQVNATSSAAASIEELTVSID
LCASNAGQANEQAAEAGQQAKAGNKDVQDSTTRVKRVNESVTSSADSLESLSDQAQQIGSIATVIKDVADQTNLLALNAA
IEAARAGEQGRGFAVVADEVRKLAERTTSSAQEITNMIGKIQDGAREAVDGMRSSRQIVADVVVAAENASATISTVEERA
AGVVSVINEIALAVGEQRQASTELAGRVEAIAQMSKENGIAVDVFSQATRELAMVAEKLQQTTLAFRME

Sequences:

>Translated_549_residues
MISFLAQFSIRAKIFGLIVLGVLAALIIGFNGISGASSMFDLTRDMHDNALKPVYLLGQAAKQAAYVNRADYRYIAESEK
KEMDQVQVNRDKFSAAMKGFLDQYRQTQLTPPEVDGLKRFDAAWAAMEGPCKQVRDLSYTDTGNGENNKKALAIMSKQCR
PLFQAADDVLTELSNINIKLADKSLEDAQGKYQALRTMSITVLVVGLVVLTALGLAIQNGIIGSLKEACRAMEKMGGGDL
TGDIKAQGRDEVADMMRSLSDTQIRLRNTVGEIIRSAASVAATSEQLAASTEQVSASIGQQVNATSSAAASIEELTVSID
LCASNAGQANEQAAEAGQQAKAGNKDVQDSTTRVKRVNESVTSSADSLESLSDQAQQIGSIATVIKDVADQTNLLALNAA
IEAARAGEQGRGFAVVADEVRKLAERTTSSAQEITNMIGKIQDGAREAVDGMRSSRQIVADVVVAAENASATISTVEERA
AGVVSVINEIALAVGEQRQASTELAGRVEAIAQMSKENGIAVDVFSQATRELAMVAEKLQQTTLAFRME
>Mature_549_residues
MISFLAQFSIRAKIFGLIVLGVLAALIIGFNGISGASSMFDLTRDMHDNALKPVYLLGQAAKQAAYVNRADYRYIAESEK
KEMDQVQVNRDKFSAAMKGFLDQYRQTQLTPPEVDGLKRFDAAWAAMEGPCKQVRDLSYTDTGNGENNKKALAIMSKQCR
PLFQAADDVLTELSNINIKLADKSLEDAQGKYQALRTMSITVLVVGLVVLTALGLAIQNGIIGSLKEACRAMEKMGGGDL
TGDIKAQGRDEVADMMRSLSDTQIRLRNTVGEIIRSAASVAATSEQLAASTEQVSASIGQQVNATSSAAASIEELTVSID
LCASNAGQANEQAAEAGQQAKAGNKDVQDSTTRVKRVNESVTSSADSLESLSDQAQQIGSIATVIKDVADQTNLLALNAA
IEAARAGEQGRGFAVVADEVRKLAERTTSSAQEITNMIGKIQDGAREAVDGMRSSRQIVADVVVAAENASATISTVEERA
AGVVSVINEIALAVGEQRQASTELAGRVEAIAQMSKENGIAVDVFSQATRELAMVAEKLQQTTLAFRME

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=493, Percent_Identity=29.6146044624746, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI2367378, Length=324, Percent_Identity=32.4074074074074, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1788194, Length=369, Percent_Identity=32.7913279132791, Blast_Score=141, Evalue=1e-34,
Organism=Escherichia coli, GI1788195, Length=332, Percent_Identity=32.5301204819277, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1789453, Length=267, Percent_Identity=29.9625468164794, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58400; Mature: 58400

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCC
>Mature Secondary Structure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HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA