Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34496865

Identifier: 34496865

GI number: 34496865

Start: 1486570

End: 1487046

Strand: Reverse

Name: 34496865

Synonym: CV_1410

Alternate gene names: NA

Gene position: 1487046-1486570 (Counterclockwise)

Preceding gene: 34496873

Following gene: 34496864

Centisome position: 31.3

GC content: 51.15

Gene sequence:

>477_bases
GTGCCGGCCCAGCCGTTCGCATCCGATGCGACTTCACGAAAATTTTATGTTCGTTTTAGTAAATTTGTGTTTGATAACAA
TCAAGCCAATAGTCCATACCCTGCCGAACCCTTGCCGCAGGCGCGTGATCCCCCGCCCTGCTCCCGGCACGCCGATGCAA
GAAATACCAAGACGCTGATTTGCAAACCGATTCAGTCAAAGCCGACGCTTTCCGCGCTCGACGGTCCGTCGCGCACGCGG
CATGGCGGCCCCGCCACCCGCGCCGCCGCGATGGGATGGCCTGCCTTGGTCGGCGTGAGTCATTCAATTCGAAAAACAAA
TGTTCATTTTGTTATTATTTATTTTCGAATTCGAACATTTAGCTATCGATTACTCATCGCAACAAGTACTGTTTCGAACA
ATTCTATTAGAAATCGAACACTCGCCCATAAATGCCAAAAACATACCAGCGCCGCAATCCAGATCACCCACCCGTAA

Upstream 100 bases:

>100_bases
CCTTTTGCTTGCTGGCTGCCTCGTCGACCACGTAGGCGAGTGTAGAGGAGTGGCTCATTTCGTTTCGTCTCTTCAATAGT
GGGTAAGCTGGCGCAGATCG

Downstream 100 bases:

>100_bases
ATTCAAACACCTTTAAATTCAATACATTAAAAAAACAGCACCAAGGAGTCCTATTGGAAAACACCTTCAGGAATCGGGAC
GTCTCTCCATCGCCGCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPAQPFASDATSRKFYVRFSKFVFDNNQANSPYPAEPLPQARDPPPCSRHADARNTKTLICKPIQSKPTLSALDGPSRTR
HGGPATRAAAMGWPALVGVSHSIRKTNVHFVIIYFRIRTFSYRLLIATSTVSNNSIRNRTLAHKCQKHTSAAIQITHP

Sequences:

>Translated_158_residues
MPAQPFASDATSRKFYVRFSKFVFDNNQANSPYPAEPLPQARDPPPCSRHADARNTKTLICKPIQSKPTLSALDGPSRTR
HGGPATRAAAMGWPALVGVSHSIRKTNVHFVIIYFRIRTFSYRLLIATSTVSNNSIRNRTLAHKCQKHTSAAIQITHP
>Mature_157_residues
PAQPFASDATSRKFYVRFSKFVFDNNQANSPYPAEPLPQARDPPPCSRHADARNTKTLICKPIQSKPTLSALDGPSRTRH
GGPATRAAAMGWPALVGVSHSIRKTNVHFVIIYFRIRTFSYRLLIATSTVSNNSIRNRTLAHKCQKHTSAAIQITHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17537; Mature: 17406

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQPFASDATSRKFYVRFSKFVFDNNQANSPYPAEPLPQARDPPPCSRHADARNTKTLI
CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
CKPIQSKPTLSALDGPSRTRHGGPATRAAAMGWPALVGVSHSIRKTNVHFVIIYFRIRTF
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHEECCCCCCEECCEEEEEEEEEEEEE
SYRLLIATSTVSNNSIRNRTLAHKCQKHTSAAIQITHP
EEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
PAQPFASDATSRKFYVRFSKFVFDNNQANSPYPAEPLPQARDPPPCSRHADARNTKTLI
CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
CKPIQSKPTLSALDGPSRTRHGGPATRAAAMGWPALVGVSHSIRKTNVHFVIIYFRIRTF
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHEECCCCCCEECCEEEEEEEEEEEEE
SYRLLIATSTVSNNSIRNRTLAHKCQKHTSAAIQITHP
EEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA