| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ycjU [C]
Identifier: 34496852
GI number: 34496852
Start: 1472157
End: 1472849
Strand: Reverse
Name: ycjU [C]
Synonym: CV_1397
Alternate gene names: 34496852
Gene position: 1472849-1472157 (Counterclockwise)
Preceding gene: 34496853
Following gene: 34496851
Centisome position: 31.0
GC content: 69.26
Gene sequence:
>693_bases ATGAGCCAAGCCGATTTTTCCCTGCTGTTCGACCTGGACGGCACGCTGGTGGACACCGACATCCTGCATTTCGGCGCCTA CCAGACCTTGCTGGCCGACCATAAACGCAGCATCACCATGCAGATCTACAAGGAACGCATCATGGGCGCGCCCAACGACG CGATCATGCGCGAACTGTTTCCCGACCTGTCCAAGGACTCGCACCGCCGCCTGGCCGAACGCAAGGAAGAACTGTTCCGC GCCGCCATCGGCAAGCTGGAGCCGACGCCCGGCGCGCTGGCGCTGTTCGAATGGGCGGAGGCGCGCCGGGTGCCGATCGC GGTGGTGACCAACGCGCCGCGCACCAACGCCGAGCGCATGCTGGCCGGACTGGATCTGCTGGGACGGATAGACGCGCTGG TGATAGGCGAGGAGCTGCCGCGCGGCAAGCCGGATCCGCTGCCCTACCTGACCGGCCTGCAGCGGCTGAACGGCCGCCCC GAGCGCGCGCTGGCCTTCGAGGACTCGCTGTCCGGCGTGCGAGCGGCCAGCGCCGCCGGCATCCACACCTTCGGCGTCGG CGCCGCGCTGCCTGCCGAATCGCTGCGCGGCGCCGGCGCCGACGAAGTGATCGCCGACTTCACCGCCGCCGAGCTGTGGC GGCGGCTGGATGCGCTGGAATTGAGCGCCGCGGCCGAGGAGTCCGGAGCATGA
Upstream 100 bases:
>100_bases TCGTCCTGCCGCTGCTGATGGCGGCGGCCTGCCTGGCCGCTGGGCAACGCCACGCGCTGCCGCACAAGGCCTGAGACTTG CGCAAACAAGGAGAACAACG
Downstream 100 bases:
>100_bases GCCCGTCCGCGCCTCCCCCCGGCCTGCCCGCCGACGCGGTCCGCATCGAGGCCGCCACCGGCAGCGGCGCAGGCGGCCAT CTGATCGCCTACAGCGCCTT
Product: beta-phosphoglucomutase
Products: beta-D-glucose 6-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSQADFSLLFDLDGTLVDTDILHFGAYQTLLADHKRSITMQIYKERIMGAPNDAIMRELFPDLSKDSHRRLAERKEELFR AAIGKLEPTPGALALFEWAEARRVPIAVVTNAPRTNAERMLAGLDLLGRIDALVIGEELPRGKPDPLPYLTGLQRLNGRP ERALAFEDSLSGVRAASAAGIHTFGVGAALPAESLRGAGADEVIADFTAAELWRRLDALELSAAAEESGA
Sequences:
>Translated_230_residues MSQADFSLLFDLDGTLVDTDILHFGAYQTLLADHKRSITMQIYKERIMGAPNDAIMRELFPDLSKDSHRRLAERKEELFR AAIGKLEPTPGALALFEWAEARRVPIAVVTNAPRTNAERMLAGLDLLGRIDALVIGEELPRGKPDPLPYLTGLQRLNGRP ERALAFEDSLSGVRAASAAGIHTFGVGAALPAESLRGAGADEVIADFTAAELWRRLDALELSAAAEESGA >Mature_229_residues SQADFSLLFDLDGTLVDTDILHFGAYQTLLADHKRSITMQIYKERIMGAPNDAIMRELFPDLSKDSHRRLAERKEELFRA AIGKLEPTPGALALFEWAEARRVPIAVVTNAPRTNAERMLAGLDLLGRIDALVIGEELPRGKPDPLPYLTGLQRLNGRPE RALAFEDSLSGVRAASAAGIHTFGVGAALPAESLRGAGADEVIADFTAAELWRRLDALELSAAAEESGA
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787576, Length=197, Percent_Identity=29.9492385786802, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790151, Length=189, Percent_Identity=26.984126984127, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321833, Length=229, Percent_Identity=25.764192139738, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321834, Length=236, Percent_Identity=25.8474576271186, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 5.4.2.6
Molecular weight: Translated: 24945; Mature: 24814
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQADFSLLFDLDGTLVDTDILHFGAYQTLLADHKRSITMQIYKERIMGAPNDAIMRELF CCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH PDLSKDSHRRLAERKEELFRAAIGKLEPTPGALALFEWAEARRVPIAVVTNAPRTNAERM HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHH LAGLDLLGRIDALVIGEELPRGKPDPLPYLTGLQRLNGRPERALAFEDSLSGVRAASAAG HHHHHHHHHHHHHEECHHCCCCCCCCCHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHCC IHTFGVGAALPAESLRGAGADEVIADFTAAELWRRLDALELSAAAEESGA CHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQADFSLLFDLDGTLVDTDILHFGAYQTLLADHKRSITMQIYKERIMGAPNDAIMRELF CCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH PDLSKDSHRRLAERKEELFRAAIGKLEPTPGALALFEWAEARRVPIAVVTNAPRTNAERM HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHH LAGLDLLGRIDALVIGEELPRGKPDPLPYLTGLQRLNGRPERALAFEDSLSGVRAASAAG HHHHHHHHHHHHHEECHHCCCCCCCCCHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHCC IHTFGVGAALPAESLRGAGADEVIADFTAAELWRRLDALELSAAAEESGA CHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-D-glucose 1-phosphate
Specific reaction: beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate
General reaction: Group transfer (intramolecular phosphate group isomerization [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]