| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496847
Identifier: 34496847
GI number: 34496847
Start: 1468329
End: 1468736
Strand: Direct
Name: 34496847
Synonym: CV_1392
Alternate gene names: NA
Gene position: 1468329-1468736 (Clockwise)
Preceding gene: 34496844
Following gene: 34496848
Centisome position: 30.91
GC content: 68.63
Gene sequence:
>408_bases ATGGACGACATCCGCTGCGCCATCATCATTGATCCCGATCTGCCGCCCGGCGTCATTGCCAATACCGCCGCCGTGCTGGC GATGTCGCTGGGCAAACGCCACCCGGAACTGGTGGGGCAGGATTTGCCGGACGCGCGCGGCCAGCCTCGGCAGGGCATCA CGACGGTGCCGATTCCGGTGCTCAAAGGCGGCGCGGACCAGTTGCGCGCGCTGCGCGCGGCTGCTAGCGAAACCGGACTG ACCCTGGTGGAGCTGACCAGCGCCACCCGCTTCACCCGCAGCTACCAGGAATACGCGGCCGCGCTGGCGGCCACGCCGGA AGAGATGGTCGAGTATCAGGGCCTGGCATTGTGCGGACCGGGCAAGCGGGTGCGGCAACTGACCGGCAGCCTGGGCCTGT TGCGCTGA
Upstream 100 bases:
>100_bases GTTCGGTTTTTTCGATTATTGAATTTCAATTGTACTTAATTGTGGATCATTTGGCGGCGGCGCATAGTGGACCGGTTCTT TTCGTGTTCAGGAGCCATTC
Downstream 100 bases:
>100_bases GGAGGCGGCATGATCTGGAACTTCATCGCGGCCACCGCGCTGGTCACCCTGATGCCAGGGCCGTCGCTGCTGCTGATCGT CGGGGCTTCGATGCGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDDIRCAIIIDPDLPPGVIANTAAVLAMSLGKRHPELVGQDLPDARGQPRQGITTVPIPVLKGGADQLRALRAAASETGL TLVELTSATRFTRSYQEYAAALAATPEEMVEYQGLALCGPGKRVRQLTGSLGLLR
Sequences:
>Translated_135_residues MDDIRCAIIIDPDLPPGVIANTAAVLAMSLGKRHPELVGQDLPDARGQPRQGITTVPIPVLKGGADQLRALRAAASETGL TLVELTSATRFTRSYQEYAAALAATPEEMVEYQGLALCGPGKRVRQLTGSLGLLR >Mature_135_residues MDDIRCAIIIDPDLPPGVIANTAAVLAMSLGKRHPELVGQDLPDARGQPRQGITTVPIPVLKGGADQLRALRAAASETGL TLVELTSATRFTRSYQEYAAALAATPEEMVEYQGLALCGPGKRVRQLTGSLGLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14276; Mature: 14276
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDIRCAIIIDPDLPPGVIANTAAVLAMSLGKRHPELVGQDLPDARGQPRQGITTVPIPV CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEECCHHH LKGGADQLRALRAAASETGLTLVELTSATRFTRSYQEYAAALAATPEEMVEYQGLALCGP HCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECC GKRVRQLTGSLGLLR CHHHHHHHHHCCCCC >Mature Secondary Structure MDDIRCAIIIDPDLPPGVIANTAAVLAMSLGKRHPELVGQDLPDARGQPRQGITTVPIPV CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEECCHHH LKGGADQLRALRAAASETGLTLVELTSATRFTRSYQEYAAALAATPEEMVEYQGLALCGP HCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECC GKRVRQLTGSLGLLR CHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA