Click here to switch to the map view.

The map label for this gene is 34496825

Identifier: 34496825

GI number: 34496825

Start: 1442397

End: 1443500

Strand: Reverse

Name: 34496825

Synonym: CV_1370

Alternate gene names: NA

Gene position: 1443500-1442397 (Counterclockwise)

Preceding gene: 34496830

Following gene: 34496821

Centisome position: 30.38

GC content: 58.79

Gene sequence:

>1104_bases
ATGGACAAGCTCAGCAGGCGAACGCTGTTGAAAGCCTCCCTAGCCGCAGGCGCGGGCTTGTGCGTGCCCAATCTGATGCA
AACATCGCGGGCGGAAGAAGCCCTGCCCGCCCCGGAAGAGATCGCGAAAGAACGAGCGGCCAAATATGTATTCAACTTCG
GCTCCGTCTATGCGACGGAAAACTACCTGACCACTCCCCACGTCCATTTGCAGATCAAGCAGATCGTCGAGAAAAGCACC
AATAACAAGGTGTATGTGAAAATCCATGACAAAGGCGCCAGGGGTTCCGAGTCCCAGCTGGCCAACGCCGTCAAATATCA
GGCTATGCAGGGCGGCCTGCTGTCGATTGCCAACCTGTCCCCGCTGGTGAACGAGTTCGACATCATCAACATCCCGTTCT
GGGCCGCCGATGACGCCAGCTATCTGCGCCTGGTAGGCTCCCATGCCTGGAACAAATACATCCTGTCCAAAACCGCCCCC
CACAGGATAAAAATCCTGTTTCACTACGTGATCGGCGCCAGAACCGCGACGACGGTCAGGCATTACGGAAAATTGATACG
GTCCCCCGAAGACTTTGCCGGCGTGCAGTACCGGATTCCGAATTCGAAAACGCTGGGCACGTTCTACAAGCTGGCCAAGG
CCATTCCGCGCGCCATTCCCTGGAACCTCACCGCGGCGACGGCGCGCGCCGGCCGGTTCGACGCGCTGGATCCCGCGATC
GTCGGGCTTTATTCAGGACCGGACAATCTCAAGAACGAAATCGGCGTCATTTCGGACATCGGCCTGGTTCACGACGGCTG
GGTGGCCATTTCCAGCACCGACTTCATCGAGTCGCTCGACGCCTCGACCCGCACCCAGTTTCTCGACGCCTTCCTGGCCA
TTCAGGCGGCGCAATTCGACGCCTATCAGAACGCCAGGAAATATTGCGAACAGGAGTTCGCCAAACTTGGCGTGAAGATC
TATGCGCCGTCGAAACAGGAGCACGCCGCGCTGGTCCATGCGTTCGGACACGCCAACGAAGTGTGGACGCCGGTGAAGAT
CGCGTTGCTGGGTCCCAATGGTCCGGCCGTATTCGACCAGCTTTACAAGGCCGCCAAGGGCTGA

Upstream 100 bases:

>100_bases
GACCTGTCGTCGCCCCCCGCGAACCGAGCCAGGCTGCCTCGATGGCCCAGTCCCGCCTCAAACTGGCCGACGGCATCCGC
GCAATGGACAGATAGACATC

Downstream 100 bases:

>100_bases
GCGCCCTTCCGGCCCGAATTGGGCCTCCCGCCTCTGCCATCCAGGCGCGGCCGAGGCCCGGCGGCATCAGCGCGGCGGCA
GGCTCCAGCGCTGGCTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter DctP Subunit

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MDKLSRRTLLKASLAAGAGLCVPNLMQTSRAEEALPAPEEIAKERAAKYVFNFGSVYATENYLTTPHVHLQIKQIVEKST
NNKVYVKIHDKGARGSESQLANAVKYQAMQGGLLSIANLSPLVNEFDIINIPFWAADDASYLRLVGSHAWNKYILSKTAP
HRIKILFHYVIGARTATTVRHYGKLIRSPEDFAGVQYRIPNSKTLGTFYKLAKAIPRAIPWNLTAATARAGRFDALDPAI
VGLYSGPDNLKNEIGVISDIGLVHDGWVAISSTDFIESLDASTRTQFLDAFLAIQAAQFDAYQNARKYCEQEFAKLGVKI
YAPSKQEHAALVHAFGHANEVWTPVKIALLGPNGPAVFDQLYKAAKG

Sequences:

>Translated_367_residues
MDKLSRRTLLKASLAAGAGLCVPNLMQTSRAEEALPAPEEIAKERAAKYVFNFGSVYATENYLTTPHVHLQIKQIVEKST
NNKVYVKIHDKGARGSESQLANAVKYQAMQGGLLSIANLSPLVNEFDIINIPFWAADDASYLRLVGSHAWNKYILSKTAP
HRIKILFHYVIGARTATTVRHYGKLIRSPEDFAGVQYRIPNSKTLGTFYKLAKAIPRAIPWNLTAATARAGRFDALDPAI
VGLYSGPDNLKNEIGVISDIGLVHDGWVAISSTDFIESLDASTRTQFLDAFLAIQAAQFDAYQNARKYCEQEFAKLGVKI
YAPSKQEHAALVHAFGHANEVWTPVKIALLGPNGPAVFDQLYKAAKG
>Mature_367_residues
MDKLSRRTLLKASLAAGAGLCVPNLMQTSRAEEALPAPEEIAKERAAKYVFNFGSVYATENYLTTPHVHLQIKQIVEKST
NNKVYVKIHDKGARGSESQLANAVKYQAMQGGLLSIANLSPLVNEFDIINIPFWAADDASYLRLVGSHAWNKYILSKTAP
HRIKILFHYVIGARTATTVRHYGKLIRSPEDFAGVQYRIPNSKTLGTFYKLAKAIPRAIPWNLTAATARAGRFDALDPAI
VGLYSGPDNLKNEIGVISDIGLVHDGWVAISSTDFIESLDASTRTQFLDAFLAIQAAQFDAYQNARKYCEQEFAKLGVKI
YAPSKQEHAALVHAFGHANEVWTPVKIALLGPNGPAVFDQLYKAAKG

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40315; Mature: 40315

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLSRRTLLKASLAAGAGLCVPNLMQTSRAEEALPAPEEIAKERAAKYVFNFGSVYATE
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEC
NYLTTPHVHLQIKQIVEKSTNNKVYVKIHDKGARGSESQLANAVKYQAMQGGLLSIANLS
CEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCC
PLVNEFDIINIPFWAADDASYLRLVGSHAWNKYILSKTAPHRIKILFHYVIGARTATTVR
HHHCCCCEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
HYGKLIRSPEDFAGVQYRIPNSKTLGTFYKLAKAIPRAIPWNLTAATARAGRFDALDPAI
HHHHHHCCCCHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHE
VGLYSGPDNLKNEIGVISDIGLVHDGWVAISSTDFIESLDASTRTQFLDAFLAIQAAQFD
EEEECCCHHHHHHCCCHHCCCEEECCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AYQNARKYCEQEFAKLGVKIYAPSKQEHAALVHAFGHANEVWTPVKIALLGPNGPAVFDQ
HHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHH
LYKAAKG
HHHHHCC
>Mature Secondary Structure
MDKLSRRTLLKASLAAGAGLCVPNLMQTSRAEEALPAPEEIAKERAAKYVFNFGSVYATE
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEC
NYLTTPHVHLQIKQIVEKSTNNKVYVKIHDKGARGSESQLANAVKYQAMQGGLLSIANLS
CEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCC
PLVNEFDIINIPFWAADDASYLRLVGSHAWNKYILSKTAPHRIKILFHYVIGARTATTVR
HHHCCCCEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
HYGKLIRSPEDFAGVQYRIPNSKTLGTFYKLAKAIPRAIPWNLTAATARAGRFDALDPAI
HHHHHHCCCCHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHE
VGLYSGPDNLKNEIGVISDIGLVHDGWVAISSTDFIESLDASTRTQFLDAFLAIQAAQFD
EEEECCCHHHHHHCCCHHCCCEEECCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AYQNARKYCEQEFAKLGVKIYAPSKQEHAALVHAFGHANEVWTPVKIALLGPNGPAVFDQ
HHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHH
LYKAAKG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA