Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34496820

Identifier: 34496820

GI number: 34496820

Start: 1437124

End: 1438329

Strand: Reverse

Name: 34496820

Synonym: CV_1365

Alternate gene names: NA

Gene position: 1438329-1437124 (Counterclockwise)

Preceding gene: 34496821

Following gene: 34496816

Centisome position: 30.27

GC content: 63.35

Gene sequence:

>1206_bases
GTGCGCGTCCCCGGCTGCGGCGGTACAATCCCGTTTTACCAGATTGAGCAAGCACCACAGGTTTCCCGCATGAAAATCAG
CAGCAACTTCGACGCAGGCAGCATCGAGATCGTCTCCGCCGACAGCCTTGAAGACATCCAACTGCGCATCCGCCGCGACA
ACGCGGCCGAATTCGCGCAGTGGTTCTACTTCCGCGTGCAAGGGGCTGCCTACCAACACTGCACCTTCCGCTTCCTCAAT
GCGGCAGAATGCGCGTACCCGCAAGGCTGGGTCGACTACCAAGCGATGGCCTCCTACGACCGCGTCAACTGGTTCCGCGT
CCCGACCCGCTACGAAGACGGCGTGATGGTGATCGAACACGTGCCGTTGTCCGGCAGCATCTACTACGCCTACTTCGAGC
CGTATTCCTACGATCAGCACCTCAACCTGATCGGCCAGGCCCAGGGCTCCGGCCTGTGCCAGGTGTCCGACCTCGGCTCC
ACGGTGCAAGGCCGCGACATGAACCTGCTGACCATAGGCCATGAGGTGGAGTCGGACCTGAAGATCTGGATCACCGCACG
CCAGCACCCCGGCGAAACGATGGCGGAGTGGTTCATCGAGGGCCTCCTCAATCGCCTGCTGGATCCGCAAGATCCGACCA
GCCGCGCGCTGCTGGACCGCGCGACCTTCTACGTGGTGCCGAACATGAATCCCGACGGCTCGGTGCTCGGCAACCTGCGC
ACCAACGCGGCCGGCGCCAACCTCAATCGGGAATGGGCCAACCCCAGCGCGGAAACCAGTCCGGAAGTGCTGGTGGTGCG
CCAGAAGATGCTGGAAACCGGGGTGGACCTGTTCCTGGACATCCACGGCGACGAGAACATCCCTTACGTATTCCTGGCCG
GAACCGAAGGCGTGCCGTCCTGGAACGCAAGGCTGGAAAAGCTGGCCGACAGTTTCCGCCACCATTTCCTGCTGGCCAGC
CCCGACTTCCAGACCGAGCACGGCTACCCGCGCAACGAACCGGGCAAGGCCAATCCCGGCATCGCCACCAACTGGGTCTG
CGAACAGTTCGGCTGCCTGGCCTTCACGCTGGAGATGCCGTTCAAGGACAACCACAACCTGCCGGACGACGACTTCGGCT
GGAACGGCCAACGCAGCCTGCGCCTCGGCGAATCCGCGCTTAGCCCGATCTACGCGGTGCTGAACGACCTGGCCCGCGGC
GAATAA

Upstream 100 bases:

>100_bases
CCGACGCGGTGAAGAACTCCGCCAAGCGCGGCGCCACCGTCTGAACGGCCCGCGCCCGTCGCCGCAACCCCGCCACGAGG
CGGGGTTTTCGCATTAACGG

Downstream 100 bases:

>100_bases
TCGCCTCGATCAAAAAAGCCGGCATTCGCCGGCTTTTTTCATGCCACTCGACTCACATCGCCACGGGAAGCTTGTCCAGC
GTCTTGACCAGCTCCACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MRVPGCGGTIPFYQIEQAPQVSRMKISSNFDAGSIEIVSADSLEDIQLRIRRDNAAEFAQWFYFRVQGAAYQHCTFRFLN
AAECAYPQGWVDYQAMASYDRVNWFRVPTRYEDGVMVIEHVPLSGSIYYAYFEPYSYDQHLNLIGQAQGSGLCQVSDLGS
TVQGRDMNLLTIGHEVESDLKIWITARQHPGETMAEWFIEGLLNRLLDPQDPTSRALLDRATFYVVPNMNPDGSVLGNLR
TNAAGANLNREWANPSAETSPEVLVVRQKMLETGVDLFLDIHGDENIPYVFLAGTEGVPSWNARLEKLADSFRHHFLLAS
PDFQTEHGYPRNEPGKANPGIATNWVCEQFGCLAFTLEMPFKDNHNLPDDDFGWNGQRSLRLGESALSPIYAVLNDLARG
E

Sequences:

>Translated_401_residues
MRVPGCGGTIPFYQIEQAPQVSRMKISSNFDAGSIEIVSADSLEDIQLRIRRDNAAEFAQWFYFRVQGAAYQHCTFRFLN
AAECAYPQGWVDYQAMASYDRVNWFRVPTRYEDGVMVIEHVPLSGSIYYAYFEPYSYDQHLNLIGQAQGSGLCQVSDLGS
TVQGRDMNLLTIGHEVESDLKIWITARQHPGETMAEWFIEGLLNRLLDPQDPTSRALLDRATFYVVPNMNPDGSVLGNLR
TNAAGANLNREWANPSAETSPEVLVVRQKMLETGVDLFLDIHGDENIPYVFLAGTEGVPSWNARLEKLADSFRHHFLLAS
PDFQTEHGYPRNEPGKANPGIATNWVCEQFGCLAFTLEMPFKDNHNLPDDDFGWNGQRSLRLGESALSPIYAVLNDLARG
E
>Mature_401_residues
MRVPGCGGTIPFYQIEQAPQVSRMKISSNFDAGSIEIVSADSLEDIQLRIRRDNAAEFAQWFYFRVQGAAYQHCTFRFLN
AAECAYPQGWVDYQAMASYDRVNWFRVPTRYEDGVMVIEHVPLSGSIYYAYFEPYSYDQHLNLIGQAQGSGLCQVSDLGS
TVQGRDMNLLTIGHEVESDLKIWITARQHPGETMAEWFIEGLLNRLLDPQDPTSRALLDRATFYVVPNMNPDGSVLGNLR
TNAAGANLNREWANPSAETSPEVLVVRQKMLETGVDLFLDIHGDENIPYVFLAGTEGVPSWNARLEKLADSFRHHFLLAS
PDFQTEHGYPRNEPGKANPGIATNWVCEQFGCLAFTLEMPFKDNHNLPDDDFGWNGQRSLRLGESALSPIYAVLNDLARG
E

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31657119, Length=330, Percent_Identity=26.969696969697, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI190194403, Length=303, Percent_Identity=27.0627062706271, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI222352158, Length=308, Percent_Identity=26.6233766233766, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI120444924, Length=329, Percent_Identity=26.4437689969605, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI170763513, Length=336, Percent_Identity=25.297619047619, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI78482633, Length=90, Percent_Identity=35.5555555555556, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI118421091, Length=262, Percent_Identity=24.8091603053435, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533904, Length=375, Percent_Identity=25.0666666666667, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI193202888, Length=326, Percent_Identity=26.9938650306748, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24641847, Length=318, Percent_Identity=23.8993710691824, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI161077807, Length=318, Percent_Identity=23.8993710691824, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28571179, Length=318, Percent_Identity=23.8993710691824, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24641845, Length=318, Percent_Identity=23.8993710691824, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24651466, Length=246, Percent_Identity=28.4552845528455, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 45088; Mature: 45088

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPGCGGTIPFYQIEQAPQVSRMKISSNFDAGSIEIVSADSLEDIQLRIRRDNAAEFAQ
CCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHH
WFYFRVQGAAYQHCTFRFLNAAECAYPQGWVDYQAMASYDRVNWFRVPTRYEDGVMVIEH
EEEEEECCCCCCCHHHEECCHHHHCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEE
VPLSGSIYYAYFEPYSYDQHLNLIGQAQGSGLCQVSDLGSTVQGRDMNLLTIGHEVESDL
CCCCCEEEEEEECCCCCCCHHCEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCE
KIWITARQHPGETMAEWFIEGLLNRLLDPQDPTSRALLDRATFYVVPNMNPDGSVLGNLR
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCCEEECCC
TNAAGANLNREWANPSAETSPEVLVVRQKMLETGVDLFLDIHGDENIPYVFLAGTEGVPS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCC
WNARLEKLADSFRHHFLLASPDFQTEHGYPRNEPGKANPGIATNWVCEQFGCLAFTLEMP
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECC
FKDNHNLPDDDFGWNGQRSLRLGESALSPIYAVLNDLARGE
CCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVPGCGGTIPFYQIEQAPQVSRMKISSNFDAGSIEIVSADSLEDIQLRIRRDNAAEFAQ
CCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHH
WFYFRVQGAAYQHCTFRFLNAAECAYPQGWVDYQAMASYDRVNWFRVPTRYEDGVMVIEH
EEEEEECCCCCCCHHHEECCHHHHCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEE
VPLSGSIYYAYFEPYSYDQHLNLIGQAQGSGLCQVSDLGSTVQGRDMNLLTIGHEVESDL
CCCCCEEEEEEECCCCCCCHHCEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCE
KIWITARQHPGETMAEWFIEGLLNRLLDPQDPTSRALLDRATFYVVPNMNPDGSVLGNLR
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCCEEECCC
TNAAGANLNREWANPSAETSPEVLVVRQKMLETGVDLFLDIHGDENIPYVFLAGTEGVPS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCC
WNARLEKLADSFRHHFLLASPDFQTEHGYPRNEPGKANPGIATNWVCEQFGCLAFTLEMP
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECC
FKDNHNLPDDDFGWNGQRSLRLGESALSPIYAVLNDLARGE
CCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8320209 [H]