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The map label for this gene is yajC [H]

Identifier: 34496801

GI number: 34496801

Start: 1418368

End: 1418694

Strand: Reverse

Name: yajC [H]

Synonym: CV_1346

Alternate gene names: 34496801

Gene position: 1418694-1418368 (Counterclockwise)

Preceding gene: 34496802

Following gene: 34496800

Centisome position: 29.86

GC content: 61.16

Gene sequence:

>327_bases
ATGTCCTTCATTACTCCCGCCTTCGCTTCCGGCGGCGCTGCCCCCGCAGGTTTCGACCTGATGGGCTTCCTGCCGATGAT
CGTGATCTTCGTGCTGTTCTGGTTCCTGATGGTCCGCCCGCAGCAGAAGCGCATGAAGGAAACCCAGAAGATGCTGTCCG
AGCTGCAGAAGGGCGACGAAGTGGTCACCCAGGGCGGCATCGTCGGCCGCGTGTCCAAGGTCAGCGAACAGTACCTGAGC
CTGGAAATCGCCGACAACGTGGAAATCCACGTGCAGCGCGGCGCCGTCAGCGCCAAGCTGGAAAAGGGTACCCTGAAGTC
CCTGTAA

Upstream 100 bases:

>100_bases
TCCCACGCCCTTGCCGCGCTCCGTGGTTGGAAAAGCCATGGAGCATGGCTACAATGCCCTGTTCGAATTCAAGTCATAAC
GAAATTTAGGAGTTTCCCTG

Downstream 100 bases:

>100_bases
TGCCGTCACGGCCGCCCCGGAAGCTTTCGCGGCGGCCTGTTCATTTCCCACTCCAGAACTAGAACATGAACCGCTACCCT
CTCTGGAAATACCTCGTCAT

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSFITPAFASGGAAPAGFDLMGFLPMIVIFVLFWFLMVRPQQKRMKETQKMLSELQKGDEVVTQGGIVGRVSKVSEQYLS
LEIADNVEIHVQRGAVSAKLEKGTLKSL

Sequences:

>Translated_108_residues
MSFITPAFASGGAAPAGFDLMGFLPMIVIFVLFWFLMVRPQQKRMKETQKMLSELQKGDEVVTQGGIVGRVSKVSEQYLS
LEIADNVEIHVQRGAVSAKLEKGTLKSL
>Mature_107_residues
SFITPAFASGGAAPAGFDLMGFLPMIVIFVLFWFLMVRPQQKRMKETQKMLSELQKGDEVVTQGGIVGRVSKVSEQYLSL
EIADNVEIHVQRGAVSAKLEKGTLKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=108, Percent_Identity=46.2962962962963, Blast_Score=99, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11875; Mature: 11744

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFITPAFASGGAAPAGFDLMGFLPMIVIFVLFWFLMVRPQQKRMKETQKMLSELQKGDE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
VVTQGGIVGRVSKVSEQYLSLEIADNVEIHVQRGAVSAKLEKGTLKSL
HHHCCCCHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHCCCCCCCC
>Mature Secondary Structure 
SFITPAFASGGAAPAGFDLMGFLPMIVIFVLFWFLMVRPQQKRMKETQKMLSELQKGDE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
VVTQGGIVGRVSKVSEQYLSLEIADNVEIHVQRGAVSAKLEKGTLKSL
HHHCCCCHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]