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The map label for this gene is ykuI [H]

Identifier: 34496787

GI number: 34496787

Start: 1402309

End: 1404117

Strand: Direct

Name: ykuI [H]

Synonym: CV_1332

Alternate gene names: 34496787

Gene position: 1402309-1404117 (Clockwise)

Preceding gene: 34496781

Following gene: 34496788

Centisome position: 29.52

GC content: 68.93

Gene sequence:

>1809_bases
ATGCAAACTTGCGTCGAGCCATCCCTGCCGGCGGGGATGGCGGGGTGGAGCCGGGAACTGGGGCAGATCATAGGCCAGCG
CCGGCTGCAGCCGGTGTTCCAGCCCATCGTCGATCTGGAGGCGGGCGGCATACTGGGCTACGAGGGACTGATACGGGGCC
CGTCCGACAGCACGCTGCACTCGCCGATGATGCTGTTCGAGGCGGCGGAGCGCTGCCGGATGCTGCTGTCGCTGGACCTG
GCCTGCCTGCGCGCCTGCGCCGAGCGTTTCGCCGAACTGGACCTGCCCGGCCTGCTGTTCGTCAACATCCACCCGGAAAC
GCTGCTGGCCGAGGAGTCCCGCCCCGGCGCGCTGCAGTCCTTCCTGGCCCGCATCGGGCTGGACCCCAAGCGGGTGATAC
TGGAGCTGACCGAAACCCGGCCCAACGGCGGCTACCTGGCCTTGCGCGAGGTGACCGCCGGGCATCGCGGACATGGGCTG
CGCATCGCGCTGGACGACCTGGGCGAGGGCTTTTCCAATCTCCGGCTGTGGTCGGAGCTTCGGCCGGACTTCGTCAAGCT
GGACAAGCACTTCGTGCAGAACATCCACCTCGATCCGCTGAAAGAGCAGTTCGTGCGCTCGATCGCCGACATCGCCCGCC
AGTCCGGCGCGCTGCTGGTCGCCGAGGGGATAGAGTCCGCGGCCGAGTTGAGAACCTTGTGCCGCCTGGGCGTGGGCTAC
GGCCAGGGCTACCTGCTGGCCAGGCCGAAGGCGGCGCCGGCGCGCGAAATGCCGCTGCCCGCCGCGTCGCTGCCGTGGTT
CGGCGGCCGCCGCCACGGGCTGCGCAAGCAGCCGTTGGCGCGCGATCTGTTGCGGGAGGTGGCGCCGCTGGAGGCCGGCG
TGCCGAACGAGACCGCCTATCGCCGCTTCGCAGACGACCCGGCCTGCTTCGCCATCCCGGTGGTGCAGGACGGCGTGCCG
GTGGGCCTGCTGCGCCGCCATCATCTGCTGGAAAGCTTCGCCAAGCCCTTCAACCGCGAGCTGTACGGCAAGAAGCCCTG
CCAGCTGATGATGGACAAGCAGCCGCTGGTGGTCAGCGCCGACCTGACCGTGCACGAGCTGTCCAGCCTGGTGGTGGCGG
CCGAGCAGCGCTACCTGGTGGATGGCTTCATCATCGCCGAAAACGGCCGCTACCTGGGCATGGGCACCGGCTTCGCGCTG
ATGCGCAAGATCACCGAGCTGCAGCTGTCCGCCGCGCGCTACGCCAACCCGCTGACCGGCCTGCCCGGCAACGTGCCGAT
CAGCGAAACCATAGACCGCTTGCTGGAAATGCGGACGCCCTTCGTGGCGGTGTACGCCGATCTCGACCACTTCAAGCCCT
TCAACGATCTGTACGGCTACGCCGCCGGCGACGACTTGATCGAGCTGCTCGCCCGCCTGCTGCTGGAATGCGTGGACCAG
GAGCGCGACTTCGTCGGCCACGTCGGCGGCGACGACTTCGTGGCGCTGATGCAATCGGAAGACTGGGAGGCGCGGCTCAG
GGCCATGCTGGCGCGCTTCGGCGAACAGGCGGCGCGGCACTTTTCCGACGCCCATCGCCTGGCCGGCGGTTTCGAGGTGG
CCTCGCGCAACGGCGAACCGGTGTTCCTGCCGCTGACTACCTTGTCGCTGGGCGTGGTGAGGGTGGGGCCGGGCCAGTAT
CTGAGCCACCACGAGATCGGCGCGGCGACGGCGGAGGCCAAGAAGCAGGCGAAGAAGCTGCCTGGAAACAGCTTGTTCGT
CGAACGGCGCCAGCCCGGCGCGCCGTCCTGCTGCGCCTGCGGACGCTGA

Upstream 100 bases:

>100_bases
TGAACAGGTGGCGGGCGTAAATCCCATTTGTAATGTCGATGACATTTTCAGGGCGTAGATTGCCCGGGTTGAGCGGAATT
CGGGCAGTCGGTCGAGAAAT

Downstream 100 bases:

>100_bases
TTCTCAGCTTCGCGCTGCTCCGCGAGCCTATCCACAAGTGTTTGATGTCTTAAACGCAATAATGCCGCGGCGCGGCATTT
TCCTTGCTGAGGCGCGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MQTCVEPSLPAGMAGWSRELGQIIGQRRLQPVFQPIVDLEAGGILGYEGLIRGPSDSTLHSPMMLFEAAERCRMLLSLDL
ACLRACAERFAELDLPGLLFVNIHPETLLAEESRPGALQSFLARIGLDPKRVILELTETRPNGGYLALREVTAGHRGHGL
RIALDDLGEGFSNLRLWSELRPDFVKLDKHFVQNIHLDPLKEQFVRSIADIARQSGALLVAEGIESAAELRTLCRLGVGY
GQGYLLARPKAAPAREMPLPAASLPWFGGRRHGLRKQPLARDLLREVAPLEAGVPNETAYRRFADDPACFAIPVVQDGVP
VGLLRRHHLLESFAKPFNRELYGKKPCQLMMDKQPLVVSADLTVHELSSLVVAAEQRYLVDGFIIAENGRYLGMGTGFAL
MRKITELQLSAARYANPLTGLPGNVPISETIDRLLEMRTPFVAVYADLDHFKPFNDLYGYAAGDDLIELLARLLLECVDQ
ERDFVGHVGGDDFVALMQSEDWEARLRAMLARFGEQAARHFSDAHRLAGGFEVASRNGEPVFLPLTTLSLGVVRVGPGQY
LSHHEIGAATAEAKKQAKKLPGNSLFVERRQPGAPSCCACGR

Sequences:

>Translated_602_residues
MQTCVEPSLPAGMAGWSRELGQIIGQRRLQPVFQPIVDLEAGGILGYEGLIRGPSDSTLHSPMMLFEAAERCRMLLSLDL
ACLRACAERFAELDLPGLLFVNIHPETLLAEESRPGALQSFLARIGLDPKRVILELTETRPNGGYLALREVTAGHRGHGL
RIALDDLGEGFSNLRLWSELRPDFVKLDKHFVQNIHLDPLKEQFVRSIADIARQSGALLVAEGIESAAELRTLCRLGVGY
GQGYLLARPKAAPAREMPLPAASLPWFGGRRHGLRKQPLARDLLREVAPLEAGVPNETAYRRFADDPACFAIPVVQDGVP
VGLLRRHHLLESFAKPFNRELYGKKPCQLMMDKQPLVVSADLTVHELSSLVVAAEQRYLVDGFIIAENGRYLGMGTGFAL
MRKITELQLSAARYANPLTGLPGNVPISETIDRLLEMRTPFVAVYADLDHFKPFNDLYGYAAGDDLIELLARLLLECVDQ
ERDFVGHVGGDDFVALMQSEDWEARLRAMLARFGEQAARHFSDAHRLAGGFEVASRNGEPVFLPLTTLSLGVVRVGPGQY
LSHHEIGAATAEAKKQAKKLPGNSLFVERRQPGAPSCCACGR
>Mature_602_residues
MQTCVEPSLPAGMAGWSRELGQIIGQRRLQPVFQPIVDLEAGGILGYEGLIRGPSDSTLHSPMMLFEAAERCRMLLSLDL
ACLRACAERFAELDLPGLLFVNIHPETLLAEESRPGALQSFLARIGLDPKRVILELTETRPNGGYLALREVTAGHRGHGL
RIALDDLGEGFSNLRLWSELRPDFVKLDKHFVQNIHLDPLKEQFVRSIADIARQSGALLVAEGIESAAELRTLCRLGVGY
GQGYLLARPKAAPAREMPLPAASLPWFGGRRHGLRKQPLARDLLREVAPLEAGVPNETAYRRFADDPACFAIPVVQDGVP
VGLLRRHHLLESFAKPFNRELYGKKPCQLMMDKQPLVVSADLTVHELSSLVVAAEQRYLVDGFIIAENGRYLGMGTGFAL
MRKITELQLSAARYANPLTGLPGNVPISETIDRLLEMRTPFVAVYADLDHFKPFNDLYGYAAGDDLIELLARLLLECVDQ
ERDFVGHVGGDDFVALMQSEDWEARLRAMLARFGEQAARHFSDAHRLAGGFEVASRNGEPVFLPLTTLSLGVVRVGPGQY
LSHHEIGAATAEAKKQAKKLPGNSLFVERRQPGAPSCCACGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1787055, Length=241, Percent_Identity=32.7800829875519, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI87082096, Length=151, Percent_Identity=35.7615894039735, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI87081743, Length=228, Percent_Identity=32.0175438596491, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1786507, Length=229, Percent_Identity=27.0742358078603, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788502, Length=241, Percent_Identity=29.8755186721992, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI226510982, Length=228, Percent_Identity=28.9473684210526, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1790496, Length=247, Percent_Identity=25.5060728744939, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787541, Length=229, Percent_Identity=29.6943231441048, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788849, Length=223, Percent_Identity=28.6995515695067, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI87081845, Length=235, Percent_Identity=26.8085106382979, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081980, Length=264, Percent_Identity=26.5151515151515, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787410, Length=223, Percent_Identity=26.0089686098655, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081921, Length=247, Percent_Identity=25.1012145748988, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 66192; Mature: 66192

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTCVEPSLPAGMAGWSRELGQIIGQRRLQPVFQPIVDLEAGGILGYEGLIRGPSDSTLH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCCCCHH
SPMMLFEAAERCRMLLSLDLACLRACAERFAELDLPGLLFVNIHPETLLAEESRPGALQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCHHHHH
FLARIGLDPKRVILELTETRPNGGYLALREVTAGHRGHGLRIALDDLGEGFSNLRLWSEL
HHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEHHHHCCCHHHHHHHHHH
RPDFVKLDKHFVQNIHLDPLKEQFVRSIADIARQSGALLVAEGIESAAELRTLCRLGVGY
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCC
GQGYLLARPKAAPAREMPLPAASLPWFGGRRHGLRKQPLARDLLREVAPLEAGVPNETAY
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
RRFADDPACFAIPVVQDGVPVGLLRRHHLLESFAKPFNRELYGKKPCQLMMDKQPLVVSA
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHCCCCCEEEEC
DLTVHELSSLVVAAEQRYLVDGFIIAENGRYLGMGTGFALMRKITELQLSAARYANPLTG
CCHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
LPGNVPISETIDRLLEMRTPFVAVYADLDHFKPFNDLYGYAAGDDLIELLARLLLECVDQ
CCCCCCHHHHHHHHHHHCCCEEEEEECHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHC
ERDFVGHVGGDDFVALMQSEDWEARLRAMLARFGEQAARHFSDAHRLAGGFEVASRNGEP
HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCE
VFLPLTTLSLGVVRVGPGQYLSHHEIGAATAEAKKQAKKLPGNSLFVERRQPGAPSCCAC
EEEEEHHHHCCEEEECCCCCCCHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
GR
CC
>Mature Secondary Structure
MQTCVEPSLPAGMAGWSRELGQIIGQRRLQPVFQPIVDLEAGGILGYEGLIRGPSDSTLH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCCCCHH
SPMMLFEAAERCRMLLSLDLACLRACAERFAELDLPGLLFVNIHPETLLAEESRPGALQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCHHHHH
FLARIGLDPKRVILELTETRPNGGYLALREVTAGHRGHGLRIALDDLGEGFSNLRLWSEL
HHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEHHHHCCCHHHHHHHHHH
RPDFVKLDKHFVQNIHLDPLKEQFVRSIADIARQSGALLVAEGIESAAELRTLCRLGVGY
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCC
GQGYLLARPKAAPAREMPLPAASLPWFGGRRHGLRKQPLARDLLREVAPLEAGVPNETAY
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
RRFADDPACFAIPVVQDGVPVGLLRRHHLLESFAKPFNRELYGKKPCQLMMDKQPLVVSA
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHCCCCCEEEEC
DLTVHELSSLVVAAEQRYLVDGFIIAENGRYLGMGTGFALMRKITELQLSAARYANPLTG
CCHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
LPGNVPISETIDRLLEMRTPFVAVYADLDHFKPFNDLYGYAAGDDLIELLARLLLECVDQ
CCCCCCHHHHHHHHHHHCCCEEEEEECHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHC
ERDFVGHVGGDDFVALMQSEDWEARLRAMLARFGEQAARHFSDAHRLAGGFEVASRNGEP
HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCE
VFLPLTTLSLGVVRVGPGQYLSHHEIGAATAEAKKQAKKLPGNSLFVERRQPGAPSCCAC
EEEEEHHHHCCEEEECCCCCCCHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
GR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]