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The map label for this gene is yecD [C]

Identifier: 34496775

GI number: 34496775

Start: 1390329

End: 1390922

Strand: Direct

Name: yecD [C]

Synonym: CV_1320

Alternate gene names: 34496775

Gene position: 1390329-1390922 (Clockwise)

Preceding gene: 34496774

Following gene: 34496777

Centisome position: 29.26

GC content: 67.34

Gene sequence:

>594_bases
ATGCCCGCGCCGCTGCGATTCTCCTCCGACAAACCCTTGCTGCTGTTGATCGACATGCAGCAGGCGGTTGACGACCCCAG
CTGGGGGCCGCGCAATCATCCGCAGGCCGAACAGGCGTGCGCCGGCCTGCTGCAGGCGTGGCGCGCGCGCGGCTTGCCAT
TGATCCACATCCGCCACGATTCCGTCGAGCCGAACTCCACCTATCGGCCGGGCCAGCCCGGCCACGCGTTCAAGCCGGAG
GTTGAGCCGCGGCCCGGGGAAACCGTGATCGCCAAGCAGACCAATAGCGCCTTCATCGGCACCGGGCTTGAGGCCTTGTT
GCGCGCCAACGGCTGGCTGGAGCTGGTCGTGGCCGGCGTCAGCACCAGCAATTCGGTCGAGGCCACGGTGCGGATGGCCG
GCAATCTGGGTTTCGCTGTCTGCTTGGCGGAGGATGGCTGTTTCACCTTCGACAAGACCGACTGGCATGGCCGCCGCCGT
TCCGCGGACGAGGTGCACGCAATGAGCCTGGCCAATCTGGACGGCGAGTATTGCCGCGTCTGCGGCAGCGCGGACATCCT
GGCCGCGCTTGGCAATATTGCCGGCGCCGCGTGA

Upstream 100 bases:

>100_bases
TCAGCGATTATCTGCCCGGAGAATACTGGGAGTCTTGACCCGGTAGTGCGCAGTCGCCCCGCGCGTGGCATCATGCTGTT
TTCATTTTCAAGGCCGCCAG

Downstream 100 bases:

>100_bases
TCGCGGTCCGGCGGCGCGAAGGCTAAGATGCCGGTCCCGGAGGTTTTGTCATCGTCATCATGTTGAGACTCACCGTATCG
CATTCCTTGCCGGCAGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPAPLRFSSDKPLLLLIDMQQAVDDPSWGPRNHPQAEQACAGLLQAWRARGLPLIHIRHDSVEPNSTYRPGQPGHAFKPE
VEPRPGETVIAKQTNSAFIGTGLEALLRANGWLELVVAGVSTSNSVEATVRMAGNLGFAVCLAEDGCFTFDKTDWHGRRR
SADEVHAMSLANLDGEYCRVCGSADILAALGNIAGAA

Sequences:

>Translated_197_residues
MPAPLRFSSDKPLLLLIDMQQAVDDPSWGPRNHPQAEQACAGLLQAWRARGLPLIHIRHDSVEPNSTYRPGQPGHAFKPE
VEPRPGETVIAKQTNSAFIGTGLEALLRANGWLELVVAGVSTSNSVEATVRMAGNLGFAVCLAEDGCFTFDKTDWHGRRR
SADEVHAMSLANLDGEYCRVCGSADILAALGNIAGAA
>Mature_196_residues
PAPLRFSSDKPLLLLIDMQQAVDDPSWGPRNHPQAEQACAGLLQAWRARGLPLIHIRHDSVEPNSTYRPGQPGHAFKPEV
EPRPGETVIAKQTNSAFIGTGLEALLRANGWLELVVAGVSTSNSVEATVRMAGNLGFAVCLAEDGCFTFDKTDWHGRRRS
ADEVHAMSLANLDGEYCRVCGSADILAALGNIAGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21111; Mature: 20980

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPLRFSSDKPLLLLIDMQQAVDDPSWGPRNHPQAEQACAGLLQAWRARGLPLIHIRHD
CCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
SVEPNSTYRPGQPGHAFKPEVEPRPGETVIAKQTNSAFIGTGLEALLRANGWLELVVAGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEEEECC
STSNSVEATVRMAGNLGFAVCLAEDGCFTFDKTDWHGRRRSADEVHAMSLANLDGEYCRV
CCCCCEEEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH
CGSADILAALGNIAGAA
CCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
PAPLRFSSDKPLLLLIDMQQAVDDPSWGPRNHPQAEQACAGLLQAWRARGLPLIHIRHD
CCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
SVEPNSTYRPGQPGHAFKPEVEPRPGETVIAKQTNSAFIGTGLEALLRANGWLELVVAGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEEEECC
STSNSVEATVRMAGNLGFAVCLAEDGCFTFDKTDWHGRRRSADEVHAMSLANLDGEYCRV
CCCCCEEEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH
CGSADILAALGNIAGAA
CCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA