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The map label for this gene is fimA [H]

Identifier: 34496749

GI number: 34496749

Start: 1361796

End: 1362320

Strand: Direct

Name: fimA [H]

Synonym: CV_1294

Alternate gene names: 34496749

Gene position: 1361796-1362320 (Clockwise)

Preceding gene: 34496747

Following gene: 34496750

Centisome position: 28.66

GC content: 61.71

Gene sequence:

>525_bases
ATGAAACAGATCGTAACTGCTGCGCTGATCGGCCTGGGCGTGTACTCTTCCGGCGCCATGGCCGCCGATGGCAAAATCAC
CGTCACTGGAAACATCGTGGCTCAGACCTGCAACATCGCGGGCACTTCCGGTCAGAACGTAACCGTGACCCTGCCGACCG
TCGGCGCTTCCGCTCTGGCCAGCTCCGGCCAGACCGCCGGCGCCACGCCGTTCGCGATCAACCTGAGCAACTGCCCGAGT
GGTCTGAAGAACGCGCAAACCCGCTTTGAAGTGGGCCCGACCGTCAACCCGACCTCCGGCAACCTGCTGAACAGCACCGG
CGCGGGCTCCGCCACCAACGTTGAAGTTCAACTGCTGAACAACAATTTCAACGCCATCAATCTGAGCACCAACGCCAATT
CCCAAGTGGTGCCGATCAGCGGCGGCTCCGCCACCATGGGTTACTACGCCCAGTACATCGCCACTGGCGCCGCCGGCGCG
GGTTCGGTGAACACCAGCGTTCAGTACTCGATGACCTACCAATAA

Upstream 100 bases:

>100_bases
GTCGAAGATGCCTTGACGTGTCGGACCGCTCTTCAACTTCTGCCCCTGGGGCAGACAATCGGGCAAACGCACTGCCTGCA
AATTCAACGGAGACTTTTAA

Downstream 100 bases:

>100_bases
AACGGCGTCATGCGGCAGGCGGCTCAGCGTGAGCCGCCTGCCGATCTTTTTTGCATGGAGGCGGGGTTGGAAATGAAACA
GGCAGTATGGCGAGGAGCGC

Product: fimbrial subunit protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKQIVTAALIGLGVYSSGAMAADGKITVTGNIVAQTCNIAGTSGQNVTVTLPTVGASALASSGQTAGATPFAINLSNCPS
GLKNAQTRFEVGPTVNPTSGNLLNSTGAGSATNVEVQLLNNNFNAINLSTNANSQVVPISGGSATMGYYAQYIATGAAGA
GSVNTSVQYSMTYQ

Sequences:

>Translated_174_residues
MKQIVTAALIGLGVYSSGAMAADGKITVTGNIVAQTCNIAGTSGQNVTVTLPTVGASALASSGQTAGATPFAINLSNCPS
GLKNAQTRFEVGPTVNPTSGNLLNSTGAGSATNVEVQLLNNNFNAINLSTNANSQVVPISGGSATMGYYAQYIATGAAGA
GSVNTSVQYSMTYQ
>Mature_174_residues
MKQIVTAALIGLGVYSSGAMAADGKITVTGNIVAQTCNIAGTSGQNVTVTLPTVGASALASSGQTAGATPFAINLSNCPS
GLKNAQTRFEVGPTVNPTSGNLLNSTGAGSATNVEVQLLNNNFNAINLSTNANSQVVPISGGSATMGYYAQYIATGAAGA
GSVNTSVQYSMTYQ

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081804, Length=183, Percent_Identity=31.1475409836066, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17245; Mature: 17245

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIVTAALIGLGVYSSGAMAADGKITVTGNIVAQTCNIAGTSGQNVTVTLPTVGASALA
CCHHHHHHHHHHHCCCCCCEECCCEEEEECCEEEEEEEECCCCCCEEEEEECCCCCHHHH
SSGQTAGATPFAINLSNCPSGLKNAQTRFEVGPTVNPTSGNLLNSTGAGSATNVEVQLLN
CCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEEC
NNFNAINLSTNANSQVVPISGGSATMGYYAQYIATGAAGAGSVNTSVQYSMTYQ
CCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKQIVTAALIGLGVYSSGAMAADGKITVTGNIVAQTCNIAGTSGQNVTVTLPTVGASALA
CCHHHHHHHHHHHCCCCCCEECCCEEEEECCEEEEEEEECCCCCCEEEEEECCCCCHHHH
SSGQTAGATPFAINLSNCPSGLKNAQTRFEVGPTVNPTSGNLLNSTGAGSATNVEVQLLN
CCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEEC
NNFNAINLSTNANSQVVPISGGSATMGYYAQYIATGAAGAGSVNTSVQYSMTYQ
CCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]