| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496748
Identifier: 34496748
GI number: 34496748
Start: 1360178
End: 1361062
Strand: Reverse
Name: 34496748
Synonym: CV_1293
Alternate gene names: NA
Gene position: 1361062-1360178 (Counterclockwise)
Preceding gene: 34496753
Following gene: 34496737
Centisome position: 28.65
GC content: 64.97
Gene sequence:
>885_bases ATGCCAGGCATGACCCCTTCCTCCAGCCAGTATCTGACGCTCAACCGGCGCCGCCATCACCTGCGCCGATGGGGCCCCGA GCACGCGCCGCTTCTGATATTGCTTCATGGCTGGATGGATAGCTCAGCCACCTTTCAATTCATGGTGGACGCGCTCTCCA GCGAATGGCAGGTGGTGGCGCCGGACTGGCGCGGTTTCGGCGACAGCCAGTGGAACGATGGCAGTTACTATTTTCCCGAT TACCTCGCCGATCTGGACGACTTGCTGCGCCAGCTGTCGCCCGGGCGTCCGGTGAATCTGCTGGGCCACAGCATGGGCGC GATGATCGCCGGCATCTACGCCGGCGTCTGTCCGCAGAGGATAGAAAAGCTGGTGCTGGCGGAAGGTTTCGGCCTCAATC CGACCCGACCGTCCGAGGCCCCCGGCCGCTATGGCCGTTGGCTGAGGGAAACCAGCCAATCCATCGGCTTCGAGCCGATG GCAAGCCTGGAACAGGCGGCGAACAAGCTGGTCGCGCGCAACCCGATGCTGACGCCCGAACGGGCACGCTGGCTGGCCGC CGAGCTGACCCGCCCTGTCGATGGCGGCTTCGTCTACCGCGCCGATCCCCGCCACAAGATGGTCAATCCGGTCTTGTACC GGCTGGAGGAAGCGATGGCCTGCTGGCGCCGCATCACCGCGCCGGTGCTATGGCTGCTGGGCGAGCACCCGTTCGACCAC CCCATCGTCAACGACGTGCTGGCCACGCTGGACCAGCGCCGCGCCTGCTTCTCCCGTCTCAGCGAGGCGACGGTGGCCGG CGCCGGACACATGCTGCAATGGGAGCAGCCAGAAAGCATGGCAGCCATGCTGGAATCATTCCTGCTGGACGATGAAACAC CATAA
Upstream 100 bases:
>100_bases ATCTTCATTTCAAGCGGCTTGAGATTGGCTCCGTGCCGATCCGCCTCACTACCCGCCAGGCCGGCATGCGTTTACACTGG GCGGCTCCACCTCATCGGGA
Downstream 100 bases:
>100_bases TCGTCTGATTTCATTGACAATCCAAAGCGCCATGACATGGCCTGCCGCTAGTCTGCCACGGCGCCCACCACGACAGGCCA CAGCCATGGCCATCGAACTG
Product: hydrolase
Products: NA
Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MPGMTPSSSQYLTLNRRRHHLRRWGPEHAPLLILLHGWMDSSATFQFMVDALSSEWQVVAPDWRGFGDSQWNDGSYYFPD YLADLDDLLRQLSPGRPVNLLGHSMGAMIAGIYAGVCPQRIEKLVLAEGFGLNPTRPSEAPGRYGRWLRETSQSIGFEPM ASLEQAANKLVARNPMLTPERARWLAAELTRPVDGGFVYRADPRHKMVNPVLYRLEEAMACWRRITAPVLWLLGEHPFDH PIVNDVLATLDQRRACFSRLSEATVAGAGHMLQWEQPESMAAMLESFLLDDETP
Sequences:
>Translated_294_residues MPGMTPSSSQYLTLNRRRHHLRRWGPEHAPLLILLHGWMDSSATFQFMVDALSSEWQVVAPDWRGFGDSQWNDGSYYFPD YLADLDDLLRQLSPGRPVNLLGHSMGAMIAGIYAGVCPQRIEKLVLAEGFGLNPTRPSEAPGRYGRWLRETSQSIGFEPM ASLEQAANKLVARNPMLTPERARWLAAELTRPVDGGFVYRADPRHKMVNPVLYRLEEAMACWRRITAPVLWLLGEHPFDH PIVNDVLATLDQRRACFSRLSEATVAGAGHMLQWEQPESMAAMLESFLLDDETP >Mature_293_residues PGMTPSSSQYLTLNRRRHHLRRWGPEHAPLLILLHGWMDSSATFQFMVDALSSEWQVVAPDWRGFGDSQWNDGSYYFPDY LADLDDLLRQLSPGRPVNLLGHSMGAMIAGIYAGVCPQRIEKLVLAEGFGLNPTRPSEAPGRYGRWLRETSQSIGFEPMA SLEQAANKLVARNPMLTPERARWLAAELTRPVDGGFVYRADPRHKMVNPVLYRLEEAMACWRRITAPVLWLLGEHPFDHP IVNDVLATLDQRRACFSRLSEATVAGAGHMLQWEQPESMAAMLESFLLDDETP
Specific function: Alkaloid degradation [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI18777795, Length=281, Percent_Identity=23.8434163701068, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI17137390, Length=281, Percent_Identity=27.7580071174377, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.10 [H]
Molecular weight: Translated: 33225; Mature: 33094
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGMTPSSSQYLTLNRRRHHLRRWGPEHAPLLILLHGWMDSSATFQFMVDALSSEWQVVA CCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEC PDWRGFGDSQWNDGSYYFPDYLADLDDLLRQLSPGRPVNLLGHSMGAMIAGIYAGVCPQR CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH IEKLVLAEGFGLNPTRPSEAPGRYGRWLRETSQSIGFEPMASLEQAANKLVARNPMLTPE HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH RARWLAAELTRPVDGGFVYRADPRHKMVNPVLYRLEEAMACWRRITAPVLWLLGEHPFDH HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PIVNDVLATLDQRRACFSRLSEATVAGAGHMLQWEQPESMAAMLESFLLDDETP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure PGMTPSSSQYLTLNRRRHHLRRWGPEHAPLLILLHGWMDSSATFQFMVDALSSEWQVVA CCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEC PDWRGFGDSQWNDGSYYFPDYLADLDDLLRQLSPGRPVNLLGHSMGAMIAGIYAGVCPQR CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH IEKLVLAEGFGLNPTRPSEAPGRYGRWLRETSQSIGFEPMASLEQAANKLVARNPMLTPE HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH RARWLAAELTRPVDGGFVYRADPRHKMVNPVLYRLEEAMACWRRITAPVLWLLGEHPFDH HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PIVNDVLATLDQRRACFSRLSEATVAGAGHMLQWEQPESMAAMLESFLLDDETP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA