Click here to switch to the map view.

The map label for this gene is ydaF [H]

Identifier: 34496744

GI number: 34496744

Start: 1355872

End: 1356399

Strand: Direct

Name: ydaF [H]

Synonym: CV_1289

Alternate gene names: 34496744

Gene position: 1355872-1356399 (Clockwise)

Preceding gene: 34496743

Following gene: 34496745

Centisome position: 28.54

GC content: 67.23

Gene sequence:

>528_bases
CTGGTGGAGATCCGCCCGCCCGAGCCGGCGCGCGACGCCGCGCGGGTCTACGCGCTGATCGAGCGCCACCGCGCCACCTT
GTCGCAATGGATGGCCGGCATCGTCAGGCCGCGATCGGCGGCGGATACCGAAGCCTTTCTTTGGTCGCAAGCGGAAGGCA
ATGAGGAAGGGCGCTGCGCGCACCGGGTAATACTGGTGGACGGCAAAATCGCAGGCATCTGTTCGCTGCACGGCATCAAT
GCCGCGCACCGCTACGCGCGCTTGGGCTACTGGCTGGCCGACAGCCATGTCGGCCGGGGGGTGATGTCGCGCGCGCTGGC
GCTGCTGATGCGCTACGCTTTCGAGGAGCTGGGACTGCACCGGCTGGAGCTGGGCTGCGCGCCGGAAAACCTGCGCAGCT
GCCGCGTCGCCGAGCGCCTGGGCTTCCGGCTGGAGGGCGAGCTGCGCGACGCGCAGTTCCTCAATGGACGTTTCTGGAAT
ATGCGTTGTTACGGCCTGCTGGCCGATGAGTGGAAGAATCGAAGATGA

Upstream 100 bases:

>100_bases
GCGAGGGCGTGCAGCGCGAGGGGCTGCATCTGGACGGCCGTTATCATGATGCCTGCCAGTACAGCATGCTGGCCGGCGAG
TGGCGGGCGCGGCGATGAGC

Downstream 100 bases:

>100_bases
CGGACTACAGCGCCGACGACTACCTGTACATGCAGCGCGCGCTGCGCCTGGCCGAGGGCGCGACGCGCCGGGCCGCGCCC
AATCCCGGCGTCGGCTGCGT

Product: ribosomal-protein-serine acetyltransferase

Products: CoA; Ribosomal-Protein N-Acetyl-L-Serine. [C]

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MVEIRPPEPARDAARVYALIERHRATLSQWMAGIVRPRSAADTEAFLWSQAEGNEEGRCAHRVILVDGKIAGICSLHGIN
AAHRYARLGYWLADSHVGRGVMSRALALLMRYAFEELGLHRLELGCAPENLRSCRVAERLGFRLEGELRDAQFLNGRFWN
MRCYGLLADEWKNRR

Sequences:

>Translated_175_residues
MVEIRPPEPARDAARVYALIERHRATLSQWMAGIVRPRSAADTEAFLWSQAEGNEEGRCAHRVILVDGKIAGICSLHGIN
AAHRYARLGYWLADSHVGRGVMSRALALLMRYAFEELGLHRLELGCAPENLRSCRVAERLGFRLEGELRDAQFLNGRFWN
MRCYGLLADEWKNRR
>Mature_175_residues
MVEIRPPEPARDAARVYALIERHRATLSQWMAGIVRPRSAADTEAFLWSQAEGNEEGRCAHRVILVDGKIAGICSLHGIN
AAHRYARLGYWLADSHVGRGVMSRALALLMRYAFEELGLHRLELGCAPENLRSCRVAERLGFRLEGELRDAQFLNGRFWN
MRCYGLLADEWKNRR

Specific function: Putative N-acetyltransferase. May act on ribosomal proteins (Potential) [H]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787697, Length=154, Percent_Identity=29.8701298701299, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787867, Length=98, Percent_Identity=36.734693877551, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 19946; Mature: 19946

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIRPPEPARDAARVYALIERHRATLSQWMAGIVRPRSAADTEAFLWSQAEGNEEGRCA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCEE
HRVILVDGKIAGICSLHGINAAHRYARLGYWLADSHVGRGVMSRALALLMRYAFEELGLH
EEEEEECCCEEEEHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCE
RLELGCAPENLRSCRVAERLGFRLEGELRDAQFLNGRFWNMRCYGLLADEWKNRR
EEECCCCCHHHHHHHHHHHCCCEECCCCCCHHHHCCEEECEEEEEEEHHHCCCCC
>Mature Secondary Structure
MVEIRPPEPARDAARVYALIERHRATLSQWMAGIVRPRSAADTEAFLWSQAEGNEEGRCA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCEE
HRVILVDGKIAGICSLHGINAAHRYARLGYWLADSHVGRGVMSRALALLMRYAFEELGLH
EEEEEECCCEEEEHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCE
RLELGCAPENLRSCRVAERLGFRLEGELRDAQFLNGRFWNMRCYGLLADEWKNRR
EEECCCCCHHHHHHHHHHHCCCEECCCCCCHHHHCCEEECEEEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; Ribosomal-Protein L-Serine [C]

Specific reaction: Acetyl-CoA + Ribosomal-Protein L-Serine = CoA + Ribosomal-Protein N-Acetyl-L-Serine. [C]

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]