| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496667
Identifier: 34496667
GI number: 34496667
Start: 1275560
End: 1276570
Strand: Reverse
Name: 34496667
Synonym: CV_1212
Alternate gene names: NA
Gene position: 1276570-1275560 (Counterclockwise)
Preceding gene: 34496669
Following gene: 34496666
Centisome position: 26.87
GC content: 58.95
Gene sequence:
>1011_bases ATGAACCCCCTCCCGCGCATCCTGCTGCTCAGCTGCGCGATGGCTGTCGCGCTAGCCGGCTGCTCCGGACATGTCCTGGA GTTCCGCAACGCGGAAGTCGTCAACGGCAAGATCTACAAAAGCGGCGCCAATGAGCCCTTCAGCGGCAAGGTAAGCAATG TGCCTGCCGCGCAGATCTTCCGTGGTCTGGATGGCATCAGCGCATTTCTCAGCACGACTAAGAACGTTCTTGGCTCTCCG CTGGATGTCTCCTCCCTCTGCACGGTCGAAATTCAGGATGGGATGCTGGACGGCAAGGCTGATTGCCAGCCACCCAATTC CAGCCATCTCGTCATGCAGTTGAATTTCAGCCAGGGCTTGCTGGATGGAAACTTCAAGACCTTCACGCCCGCAGATTCCG ATCAGCCGGTCATCAGCGCCACCTTCAGCAAGGGCCGAGCCAATGGAAAGTTGGAAATCTTCAGCCCGCAAACCCACAAG CTGATCTACCACGTGAACTGGGAAAACGGCAGCCTGGTCGGCACCGAGGAAGGCTTCGATGCGAATACCGGCAACCTGAC CGCGCGCGCCCAGATAGCAAACGGCAAGCTCCAGGGCGAACAGATCCGCTATGCGCCTGATGGCAAGCGCGTCATTTACC GGGTCAAGTACGTCAATGGCCTCAAGGAAGGCATCGAGGAGGCATACGACCCCGACTCCGGCAAACCGACCTTGCGTGCC GAATGGGCAAACGGCGCCCTGAACGGCACGTATCAGACCTGGAAAGATGGCGTTCTGGATCAAGATGGGAAATACGAACA CGGCACCGAAATCCAGCTTAGCTCCGCCTATGACCGGGAACGCGCGCAAGAGACTTCCCAGTCACCCGACGCCCTCAGCG CCTGCCAGGAGGCCTGGGTCGCGGCATTCCGCAAAGCGTCCCCGAATGGCGACTTCGCCTTGATCCGCCAGGATCAGCTG GCTGAATGGGAACAGCAATGCAAACAAGGCAAATCCCCTGCCAATACCTAA
Upstream 100 bases:
>100_bases TGAAATTCAACCTTTTAAGTAGAATTTCAATGCAAAGGGGCGATATCCCTCGTCATCCCGAATCGCCCGTTCTCTCCTCT ATCGAATAAGGAAATCTGTG
Downstream 100 bases:
>100_bases ACCCTTTTACAAACAGCACGATCTGAGAATCGTGCGCTTACCGTGGAGAACATGATGCGTAAATTGACCCTATTGGCCCT GGCCAGCTTGCTGAGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposition Protein
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNPLPRILLLSCAMAVALAGCSGHVLEFRNAEVVNGKIYKSGANEPFSGKVSNVPAAQIFRGLDGISAFLSTTKNVLGSP LDVSSLCTVEIQDGMLDGKADCQPPNSSHLVMQLNFSQGLLDGNFKTFTPADSDQPVISATFSKGRANGKLEIFSPQTHK LIYHVNWENGSLVGTEEGFDANTGNLTARAQIANGKLQGEQIRYAPDGKRVIYRVKYVNGLKEGIEEAYDPDSGKPTLRA EWANGALNGTYQTWKDGVLDQDGKYEHGTEIQLSSAYDRERAQETSQSPDALSACQEAWVAAFRKASPNGDFALIRQDQL AEWEQQCKQGKSPANT
Sequences:
>Translated_336_residues MNPLPRILLLSCAMAVALAGCSGHVLEFRNAEVVNGKIYKSGANEPFSGKVSNVPAAQIFRGLDGISAFLSTTKNVLGSP LDVSSLCTVEIQDGMLDGKADCQPPNSSHLVMQLNFSQGLLDGNFKTFTPADSDQPVISATFSKGRANGKLEIFSPQTHK LIYHVNWENGSLVGTEEGFDANTGNLTARAQIANGKLQGEQIRYAPDGKRVIYRVKYVNGLKEGIEEAYDPDSGKPTLRA EWANGALNGTYQTWKDGVLDQDGKYEHGTEIQLSSAYDRERAQETSQSPDALSACQEAWVAAFRKASPNGDFALIRQDQL AEWEQQCKQGKSPANT >Mature_336_residues MNPLPRILLLSCAMAVALAGCSGHVLEFRNAEVVNGKIYKSGANEPFSGKVSNVPAAQIFRGLDGISAFLSTTKNVLGSP LDVSSLCTVEIQDGMLDGKADCQPPNSSHLVMQLNFSQGLLDGNFKTFTPADSDQPVISATFSKGRANGKLEIFSPQTHK LIYHVNWENGSLVGTEEGFDANTGNLTARAQIANGKLQGEQIRYAPDGKRVIYRVKYVNGLKEGIEEAYDPDSGKPTLRA EWANGALNGTYQTWKDGVLDQDGKYEHGTEIQLSSAYDRERAQETSQSPDALSACQEAWVAAFRKASPNGDFALIRQDQL AEWEQQCKQGKSPANT
Specific function: Unknown
COG id: COG2849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36421; Mature: 36421
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLPRILLLSCAMAVALAGCSGHVLEFRNAEVVNGKIYKSGANEPFSGKVSNVPAAQIF CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCEEEECCCCCCCCCCCCCCCHHHHH RGLDGISAFLSTTKNVLGSPLDVSSLCTVEIQDGMLDGKADCQPPNSSHLVMQLNFSQGL HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCC LDGNFKTFTPADSDQPVISATFSKGRANGKLEIFSPQTHKLIYHVNWENGSLVGTEEGFD CCCCCEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCCCEEECCCCCC ANTGNLTARAQIANGKLQGEQIRYAPDGKRVIYRVKYVNGLKEGIEEAYDPDSGKPTLRA CCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEE EWANGALNGTYQTWKDGVLDQDGKYEHGTEIQLSSAYDRERAQETSQSPDALSACQEAWV ECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHH AAFRKASPNGDFALIRQDQLAEWEQQCKQGKSPANT HHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNPLPRILLLSCAMAVALAGCSGHVLEFRNAEVVNGKIYKSGANEPFSGKVSNVPAAQIF CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCEEEECCCCCCCCCCCCCCCHHHHH RGLDGISAFLSTTKNVLGSPLDVSSLCTVEIQDGMLDGKADCQPPNSSHLVMQLNFSQGL HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCC LDGNFKTFTPADSDQPVISATFSKGRANGKLEIFSPQTHKLIYHVNWENGSLVGTEEGFD CCCCCEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCCCEEECCCCCC ANTGNLTARAQIANGKLQGEQIRYAPDGKRVIYRVKYVNGLKEGIEEAYDPDSGKPTLRA CCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEE EWANGALNGTYQTWKDGVLDQDGKYEHGTEIQLSSAYDRERAQETSQSPDALSACQEAWV ECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHH AAFRKASPNGDFALIRQDQLAEWEQQCKQGKSPANT HHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA