| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fixG [H]
Identifier: 34496625
GI number: 34496625
Start: 1229218
End: 1230651
Strand: Reverse
Name: fixG [H]
Synonym: CV_1170
Alternate gene names: 34496625
Gene position: 1230651-1229218 (Counterclockwise)
Preceding gene: 34496626
Following gene: 34496624
Centisome position: 25.9
GC content: 62.55
Gene sequence:
>1434_bases ATGTCCGAATCGCTGAAGAAAATTCCGATCAAGGTTGAAGCCGCCGGCCAGGACAAAGAAACCGTCTCGCTGTACGAATC CCAAAAGAAAATCTACGTCCGCGCCGCCAAGGGCATGTTCAACAATCTGCGCATCCTGTTCGTGCTCGGCACCCAGCTGG TCTACCTGGGCCTGCCCTGGCTGCAATGGAACGGCCGCCAGGCGGTGCTGTTCGACCTGGCGGACCGCAAGTTCTACCTG TTCGGCCTCACCGTCTGGCCGCAGGACTTCGTCTACCTGGCCGCGCTGTTGATGTGCTGCGCCTTCGGCCTGTTCACCTG GACCACCATCGCCGGCCGGCTATGGTGCGGCTACTCCTGTCCGCAGACGGTGTACACCGAGATCATGCTGTGGATAGAAC AATGGGTGGAGGGCGACCGCAACAAACGCATCAAGCTTGACGCCTCGCCGATGGGCTTGCGCAAGCTCAGGCTGAAGTCG ACCAAGCACTTCATCATGATCGCGTTCTCGCTGTGGACCGGCTTCACCCTGGTCGGCTATTTCACGCCGATCCGCAGCCT GGTCGCGGCGCTGCCCACCTTCGGCTACGGCCCGTGGGAAACGTTCTGGATGTTCTTCTACGGCGGCTTCACCTATCTGT TCGCCGGCTTCATGCGCGAGCAGGTGTGCAAGTACATGTGCCCCTACGCCCGCTTCCAGAGCGTGATGTTCGACGCCGAC ACGCTGATCATCTCCTACGACGAGGCCCGCGGCGAGCCGCGCGGCGCGCGCAAGAAGGGCACGGATCCGAAGGAGCAGGG CCTGGGCTCCTGCATCAACTGCAGCATCTGCGTGCAGGTGTGCCCGGTGGGCATCGACATCCGCAACGGCCTGCAATACG AGTGCATAGGCTGCGCCGCCTGCATCGACGCCTGCGACGAAGTGATGGACAAGATGGGCTACCCGCGCGGCCTGATCCGC TACACCACCGAGAACGCGCTGGAAGGCAAGTACCCGGAAAAGGAAATCGCGTCGCGGCTGAAACGGCCCCGCGTGGTGCT GTACATGCTGGTGCTGAGCGCGGTGATCATCGCCGCCGTCGCCTCGCTGGCGATGCGCAAGCCGTTCAAGGTGGACATCC TGCGCGACCGCGCGTCGCTGGTGCGCGAGACCGATGAGGGCTGGCTGGAAAACACCTACATCATCAAGATCATCAACACC ACGGAACATCCGCAGCAATTCCGCATCACAGCGGAAGGCCTGCCCGACATCAAGGTCAAGACCGAAACGCCGCTGGTGGC CATTCCCGCCGCCGCCACCGACAGCGCCACCGTGCACGTGGAGGCCGACCCGCAGTACGCGACCAAGGGCAGCCACCCGA TCCGCTTCATCGTAGAATCCGCCGGCGATCCCTCGCTGCGGGTAGAAGAAAAATCCAGCTTCATCGGAGAATGA
Upstream 100 bases:
>100_bases CGCCCCGAGCGGGCGGCGCGCTTCGCCTCCCACCCACCCAGAGGCTTTGGTAGAGCGCATCGCCCGGTGAGTTTCACCAA ACCCTCTTCAGGAAAACGAC
Downstream 100 bases:
>100_bases CATGCAACACACCGCCCACCACCCCGCCCGCCCCTGGTACAAGGAGCCCTGGCCCTGGATACTGTTCGGCCTGCCGGCGG TGTCCGTGGTCGTCGGCATC
Product: iron-sulfur 4Fe-4S ferredoxin transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MSESLKKIPIKVEAAGQDKETVSLYESQKKIYVRAAKGMFNNLRILFVLGTQLVYLGLPWLQWNGRQAVLFDLADRKFYL FGLTVWPQDFVYLAALLMCCAFGLFTWTTIAGRLWCGYSCPQTVYTEIMLWIEQWVEGDRNKRIKLDASPMGLRKLRLKS TKHFIMIAFSLWTGFTLVGYFTPIRSLVAALPTFGYGPWETFWMFFYGGFTYLFAGFMREQVCKYMCPYARFQSVMFDAD TLIISYDEARGEPRGARKKGTDPKEQGLGSCINCSICVQVCPVGIDIRNGLQYECIGCAACIDACDEVMDKMGYPRGLIR YTTENALEGKYPEKEIASRLKRPRVVLYMLVLSAVIIAAVASLAMRKPFKVDILRDRASLVRETDEGWLENTYIIKIINT TEHPQQFRITAEGLPDIKVKTETPLVAIPAAATDSATVHVEADPQYATKGSHPIRFIVESAGDPSLRVEEKSSFIGE
Sequences:
>Translated_477_residues MSESLKKIPIKVEAAGQDKETVSLYESQKKIYVRAAKGMFNNLRILFVLGTQLVYLGLPWLQWNGRQAVLFDLADRKFYL FGLTVWPQDFVYLAALLMCCAFGLFTWTTIAGRLWCGYSCPQTVYTEIMLWIEQWVEGDRNKRIKLDASPMGLRKLRLKS TKHFIMIAFSLWTGFTLVGYFTPIRSLVAALPTFGYGPWETFWMFFYGGFTYLFAGFMREQVCKYMCPYARFQSVMFDAD TLIISYDEARGEPRGARKKGTDPKEQGLGSCINCSICVQVCPVGIDIRNGLQYECIGCAACIDACDEVMDKMGYPRGLIR YTTENALEGKYPEKEIASRLKRPRVVLYMLVLSAVIIAAVASLAMRKPFKVDILRDRASLVRETDEGWLENTYIIKIINT TEHPQQFRITAEGLPDIKVKTETPLVAIPAAATDSATVHVEADPQYATKGSHPIRFIVESAGDPSLRVEEKSSFIGE >Mature_476_residues SESLKKIPIKVEAAGQDKETVSLYESQKKIYVRAAKGMFNNLRILFVLGTQLVYLGLPWLQWNGRQAVLFDLADRKFYLF GLTVWPQDFVYLAALLMCCAFGLFTWTTIAGRLWCGYSCPQTVYTEIMLWIEQWVEGDRNKRIKLDASPMGLRKLRLKST KHFIMIAFSLWTGFTLVGYFTPIRSLVAALPTFGYGPWETFWMFFYGGFTYLFAGFMREQVCKYMCPYARFQSVMFDADT LIISYDEARGEPRGARKKGTDPKEQGLGSCINCSICVQVCPVGIDIRNGLQYECIGCAACIDACDEVMDKMGYPRGLIRY TTENALEGKYPEKEIASRLKRPRVVLYMLVLSAVIIAAVASLAMRKPFKVDILRDRASLVRETDEGWLENTYIIKIINTT EHPQQFRITAEGLPDIKVKTETPLVAIPAAATDSATVHVEADPQYATKGSHPIRFIVESAGDPSLRVEEKSSFIGE
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53983; Mature: 53851
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESLKKIPIKVEAAGQDKETVSLYESQKKIYVRAAKGMFNNLRILFVLGTQLVYLGLPW CCCCCHHCCEEEEECCCCCHHHHHHHCCHHEEEEEHHCHHCCCEEEEEEHHHHHHHCCCE LQWNGRQAVLFDLADRKFYLFGLTVWPQDFVYLAALLMCCAFGLFTWTTIAGRLWCGYSC EEECCCEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC PQTVYTEIMLWIEQWVEGDRNKRIKLDASPMGLRKLRLKSTKHFIMIAFSLWTGFTLVGY CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEEEEEEHHHHHHHHHHH FTPIRSLVAALPTFGYGPWETFWMFFYGGFTYLFAGFMREQVCKYMCPYARFQSVMFDAD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC TLIISYDEARGEPRGARKKGTDPKEQGLGSCINCSICVQVCPVGIDIRNGLQYECIGCAA EEEEEEHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCEECCCCCCEEHHHHHH CIDACDEVMDKMGYPRGLIRYTTENALEGKYPEKEIASRLKRPRVVLYMLVLSAVIIAAV HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH ASLAMRKPFKVDILRDRASLVRETDEGWLENTYIIKIINTTEHPQQFRITAEGLPDIKVK HHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEE TETPLVAIPAAATDSATVHVEADPQYATKGSHPIRFIVESAGDPSLRVEEKSSFIGE CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCHHCCCC >Mature Secondary Structure SESLKKIPIKVEAAGQDKETVSLYESQKKIYVRAAKGMFNNLRILFVLGTQLVYLGLPW CCCCHHCCEEEEECCCCCHHHHHHHCCHHEEEEEHHCHHCCCEEEEEEHHHHHHHCCCE LQWNGRQAVLFDLADRKFYLFGLTVWPQDFVYLAALLMCCAFGLFTWTTIAGRLWCGYSC EEECCCEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC PQTVYTEIMLWIEQWVEGDRNKRIKLDASPMGLRKLRLKSTKHFIMIAFSLWTGFTLVGY CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEEEEEEHHHHHHHHHHH FTPIRSLVAALPTFGYGPWETFWMFFYGGFTYLFAGFMREQVCKYMCPYARFQSVMFDAD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC TLIISYDEARGEPRGARKKGTDPKEQGLGSCINCSICVQVCPVGIDIRNGLQYECIGCAA EEEEEEHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCEECCCCCCEEHHHHHH CIDACDEVMDKMGYPRGLIRYTTENALEGKYPEKEIASRLKRPRVVLYMLVLSAVIIAAV HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH ASLAMRKPFKVDILRDRASLVRETDEGWLENTYIIKIINTTEHPQQFRITAEGLPDIKVK HHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEE TETPLVAIPAAATDSATVHVEADPQYATKGSHPIRFIVESAGDPSLRVEEKSSFIGE CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]