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The map label for this gene is zntR [H]

Identifier: 34496608

GI number: 34496608

Start: 1211318

End: 1211824

Strand: Reverse

Name: zntR [H]

Synonym: CV_1153

Alternate gene names: 34496608

Gene position: 1211824-1211318 (Counterclockwise)

Preceding gene: 34496610

Following gene: 34496605

Centisome position: 25.51

GC content: 66.67

Gene sequence:

>507_bases
ATGTTGATCGGAGAACTGGCGCGCCAGACCGGCTGCGAGGTGGAAACCATACGCTACTACGAGCGCGAGGGCCTGCTGTC
CGCGCCGCAGCGCTCGGCCTCCGGCTACCGCCGCTACACCGCGGAGCAGCTGGGCGAGCTGAACTTCATCCTGCACTGCC
GCTCGCTGGGCATGTCGCTGGCCGACATCCGCAACCTGGCCGCGTTCAAGGCCGACCACGAACACGACTGCGAGGACATC
AATCTGCTGATCGACCAGCAGATCGCCAAGGTGCATCAGCAGGTGGAAGCTCTGCGGCTGCTGGAGCAGCAGCTGCTGGC
GCTGCGCGACAAGTGCCACGACAGCCACGCGGCGGCCGATTGCGGCATCCTGCAGACGCTGGTGGAGGCAGCCGAGGGCG
CGCCCTGCGTCTGCCACACCCCGTTCGGCCAGGACAACCACGGCCACAGCCAGGACTACGACCACGCGGCCAAAAAAAAT
GGCCGGACCCCAAAGGGCCGGCCTTAA

Upstream 100 bases:

>100_bases
TAACGCGTGATGCTTGACATATGCGCCTCCATTGGTAGTCTGGGCACATTGCACACCCTGTAGTCACTACAGGGTCAAGC
GTTTTTCTCGGGAGAACGTC

Downstream 100 bases:

>100_bases
ATCAACGCTCGTTTGGGGAAGAGGAGAAACCCACCGACCACCACCCCACGGCAGTCAGCTCACAACACAATCGTTACAGC
CAGTGGCTGATCAGCGGCGC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLIGELARQTGCEVETIRYYEREGLLSAPQRSASGYRRYTAEQLGELNFILHCRSLGMSLADIRNLAAFKADHEHDCEDI
NLLIDQQIAKVHQQVEALRLLEQQLLALRDKCHDSHAAADCGILQTLVEAAEGAPCVCHTPFGQDNHGHSQDYDHAAKKN
GRTPKGRP

Sequences:

>Translated_168_residues
MLIGELARQTGCEVETIRYYEREGLLSAPQRSASGYRRYTAEQLGELNFILHCRSLGMSLADIRNLAAFKADHEHDCEDI
NLLIDQQIAKVHQQVEALRLLEQQLLALRDKCHDSHAAADCGILQTLVEAAEGAPCVCHTPFGQDNHGHSQDYDHAAKKN
GRTPKGRP
>Mature_168_residues
MLIGELARQTGCEVETIRYYEREGLLSAPQRSASGYRRYTAEQLGELNFILHCRSLGMSLADIRNLAAFKADHEHDCEDI
NLLIDQQIAKVHQQVEALRLLEQQLLALRDKCHDSHAAADCGILQTLVEAAEGAPCVCHTPFGQDNHGHSQDYDHAAKKN
GRTPKGRP

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=138, Percent_Identity=34.0579710144928, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786695, Length=127, Percent_Identity=33.0708661417323, Blast_Score=80, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 18728; Mature: 18728

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGELARQTGCEVETIRYYEREGLLSAPQRSASGYRRYTAEQLGELNFILHCRSLGMSL
CCHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ADIRNLAAFKADHEHDCEDINLLIDQQIAKVHQQVEALRLLEQQLLALRDKCHDSHAAAD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
CGILQTLVEAAEGAPCVCHTPFGQDNHGHSQDYDHAAKKNGRTPKGRP
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLIGELARQTGCEVETIRYYEREGLLSAPQRSASGYRRYTAEQLGELNFILHCRSLGMSL
CCHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ADIRNLAAFKADHEHDCEDINLLIDQQIAKVHQQVEALRLLEQQLLALRDKCHDSHAAAD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
CGILQTLVEAAEGAPCVCHTPFGQDNHGHSQDYDHAAKKNGRTPKGRP
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]