| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496413
Identifier: 34496413
GI number: 34496413
Start: 992340
End: 992543
Strand: Reverse
Name: 34496413
Synonym: CV_0958
Alternate gene names: NA
Gene position: 992543-992340 (Counterclockwise)
Preceding gene: 34496414
Following gene: 34496412
Centisome position: 20.89
GC content: 59.8
Gene sequence:
>204_bases ATGAGACATCAACTTGTCACCCAGAAGCTGTGGAAATCCTTACAGCAGCTGCTTGCCCTGCCACCTCGTCGCCGTGGCAG GGGTCGCCCCCGCTTGGATGATCGGGCCGCTCTGAACGGCATTCTATTTGTCCTCACCACGGGTATCCCATGGGAAGATC TGCCCCAGGAACTGGGCTTCGGCAGCGGCATGACCTGCTGGTGA
Upstream 100 bases:
>100_bases GCTTGAACATCAACTTCACAGACGCGACTGATCATTGAATGGACTGACCCGGCTCCTGTAGGCATTCCTGCCTTATGATG CCGAGCCTTGTCAGACGGGC
Downstream 100 bases:
>100_bases CGGCTACGAGATTGGCAGCTCAAAGGTCTCTGGGATCAGCGTCATCTGACATTGCTCACGCAGCGTCGACGGGGCGAGTG TTGCCAGCCCCGGGGGGGGG
Product: tis1421-transposase orfa protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MRHQLVTQKLWKSLQQLLALPPRRRGRGRPRLDDRAALNGILFVLTTGIPWEDLPQELGFGSGMTCW
Sequences:
>Translated_67_residues MRHQLVTQKLWKSLQQLLALPPRRRGRGRPRLDDRAALNGILFVLTTGIPWEDLPQELGFGSGMTCW >Mature_67_residues MRHQLVTQKLWKSLQQLLALPPRRRGRGRPRLDDRAALNGILFVLTTGIPWEDLPQELGFGSGMTCW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7697; Mature: 7697
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHQLVTQKLWKSLQQLLALPPRRRGRGRPRLDDRAALNGILFVLTTGIPWEDLPQELGF CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC GSGMTCW CCCCCCC >Mature Secondary Structure MRHQLVTQKLWKSLQQLLALPPRRRGRGRPRLDDRAALNGILFVLTTGIPWEDLPQELGF CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC GSGMTCW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA