| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pstS [H]
Identifier: 34496393
GI number: 34496393
Start: 973280
End: 974317
Strand: Reverse
Name: pstS [H]
Synonym: CV_0938
Alternate gene names: 34496393
Gene position: 974317-973280 (Counterclockwise)
Preceding gene: 34496412
Following gene: 34496392
Centisome position: 20.51
GC content: 63.58
Gene sequence:
>1038_bases ATGAAACAGTCTGTTCGTCTGGCCGCCATCCTGGGTTCCACGCTGATCGCAGGCTCGGTCTACGCGGCTGACATCACCGG CGCCGGCGCGACCTTCCCCTACCCGCTGTACGCCAAGTGGGCGGCGACGTACAAGGGCAGCACCGGCAACAACATGAACT ACCAGTCCATTGGCTCCGGCGGCGGCATCAAGCAGATCCAGTCCAAGACCGTGGATTTCGGCGCCTCCGACATGCCGCTG AAGCCGGAAGAGCTGGAAAAGGCCGGCCTGACCCAGTTCCCGACCGTGATGGGCGGCGTGGTGCCGGTGTACAACATCCC GGGCATCGCCGCCGGCCAGATCAAGTTCACCGGCCCGCTGCTGGCCGACATCTACATGGGCAAGGTTTCCAAATGGAACG ACGCCGCCATCGCCAAGCTGAACCCGGGCGTCAAGCTGCCTGACCAGCGCATCTCGGTGGTGCGCCGCTCCGACGGCTCC GGCACCACCTTCATCTTCACCAATTACCTGTCCAAGGTTTCGCCGGAATGGGCGAAAGACGTCGGCTCCAACACCGCCGT CAGCTGGAAGGGCAGCTCGGTCGGCGGCAAGGGCAACGAAGGCGTGGCCAACTACGTGTCGCGCATCAAGGGCGCCATCG GCTACGTCGAATACGCCTACGCCAAGCAGAACAAGCTGGCCTACGGCCTGCTGCAGAACCAGGCCGGCGCTTTCGTGAAG CCGGATGAGGCCTCGTTCAAGGCCGCCGCGGCCAACGCCGACTGGAAAAAGGCCCCGGGCTTCTACCTGCTGCTGACCAA CCAGCCGGGCAAGGCCAGCTGGCCGATCGCCGGCGCCACCTTCATCCTGATGCACAAGAAGCAGGACAAGCCGGCCCAAG CCGCCGAAGTGCTGAAATACTTCGACTGGGCTTACAAGAACGGCGACAAGACCGCGCAGGAGCTGGACTACATTCCGATG CCCGACAATGTGAAGGGCGTGATCCGCACCAGCTGGAAACAGATCACCGACGGCAGCGGCAAGGCTGTCTGGAACTGA
Upstream 100 bases:
>100_bases TGGATCAAGCATTTACGACTTGTAATATTAATGAAAGATTTGCCCGATACGATGGCGACCATCACAACGCAGTCCCATCC TTTCGTTCGGGAGTTAAGCA
Downstream 100 bases:
>100_bases CCGGCGGCGCTTATACTGTCGCATCCGGGCCGGGGGGAGTTCGCTTCCTCCGGCCTTGTGTCTGAACCATCAAGAATCGG CGCATGCATAAACTGAGCAA
Product: phosphate ABC transporter substrate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKQSVRLAAILGSTLIAGSVYAADITGAGATFPYPLYAKWAATYKGSTGNNMNYQSIGSGGGIKQIQSKTVDFGASDMPL KPEELEKAGLTQFPTVMGGVVPVYNIPGIAAGQIKFTGPLLADIYMGKVSKWNDAAIAKLNPGVKLPDQRISVVRRSDGS GTTFIFTNYLSKVSPEWAKDVGSNTAVSWKGSSVGGKGNEGVANYVSRIKGAIGYVEYAYAKQNKLAYGLLQNQAGAFVK PDEASFKAAAANADWKKAPGFYLLLTNQPGKASWPIAGATFILMHKKQDKPAQAAEVLKYFDWAYKNGDKTAQELDYIPM PDNVKGVIRTSWKQITDGSGKAVWN
Sequences:
>Translated_345_residues MKQSVRLAAILGSTLIAGSVYAADITGAGATFPYPLYAKWAATYKGSTGNNMNYQSIGSGGGIKQIQSKTVDFGASDMPL KPEELEKAGLTQFPTVMGGVVPVYNIPGIAAGQIKFTGPLLADIYMGKVSKWNDAAIAKLNPGVKLPDQRISVVRRSDGS GTTFIFTNYLSKVSPEWAKDVGSNTAVSWKGSSVGGKGNEGVANYVSRIKGAIGYVEYAYAKQNKLAYGLLQNQAGAFVK PDEASFKAAAANADWKKAPGFYLLLTNQPGKASWPIAGATFILMHKKQDKPAQAAEVLKYFDWAYKNGDKTAQELDYIPM PDNVKGVIRTSWKQITDGSGKAVWN >Mature_345_residues MKQSVRLAAILGSTLIAGSVYAADITGAGATFPYPLYAKWAATYKGSTGNNMNYQSIGSGGGIKQIQSKTVDFGASDMPL KPEELEKAGLTQFPTVMGGVVPVYNIPGIAAGQIKFTGPLLADIYMGKVSKWNDAAIAKLNPGVKLPDQRISVVRRSDGS GTTFIFTNYLSKVSPEWAKDVGSNTAVSWKGSSVGGKGNEGVANYVSRIKGAIGYVEYAYAKQNKLAYGLLQNQAGAFVK PDEASFKAAAANADWKKAPGFYLLLTNQPGKASWPIAGATFILMHKKQDKPAQAAEVLKYFDWAYKNGDKTAQELDYIPM PDNVKGVIRTSWKQITDGSGKAVWN
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=333, Percent_Identity=57.6576576576577, Blast_Score=375, Evalue=1e-105,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36889; Mature: 36889
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSVRLAAILGSTLIAGSVYAADITGAGATFPYPLYAKWAATYKGSTGNNMNYQSIGSG CCCCEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHEEEEEEECCCCCCCCCHHCCCCC GGIKQIQSKTVDFGASDMPLKPEELEKAGLTQFPTVMGGVVPVYNIPGIAAGQIKFTGPL CCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHCCCEEEECCCCCEECEEEECCCH LADIYMGKVSKWNDAAIAKLNPGVKLPDQRISVVRRSDGSGTTFIFTNYLSKVSPEWAKD HHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHEEECCCCCCEEEEEHHHHHCCCHHHHH VGSNTAVSWKGSSVGGKGNEGVANYVSRIKGAIGYVEYAYAKQNKLAYGLLQNQAGAFVK CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCEEC PDEASFKAAAANADWKKAPGFYLLLTNQPGKASWPIAGATFILMHKKQDKPAQAAEVLKY CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH FDWAYKNGDKTAQELDYIPMPDNVKGVIRTSWKQITDGSGKAVWN HHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKQSVRLAAILGSTLIAGSVYAADITGAGATFPYPLYAKWAATYKGSTGNNMNYQSIGSG CCCCEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHEEEEEEECCCCCCCCCHHCCCCC GGIKQIQSKTVDFGASDMPLKPEELEKAGLTQFPTVMGGVVPVYNIPGIAAGQIKFTGPL CCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHCCCEEEECCCCCEECEEEECCCH LADIYMGKVSKWNDAAIAKLNPGVKLPDQRISVVRRSDGSGTTFIFTNYLSKVSPEWAKD HHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHEEECCCCCCEEEEEHHHHHCCCHHHHH VGSNTAVSWKGSSVGGKGNEGVANYVSRIKGAIGYVEYAYAKQNKLAYGLLQNQAGAFVK CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCEEC PDEASFKAAAANADWKKAPGFYLLLTNQPGKASWPIAGATFILMHKKQDKPAQAAEVLKY CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH FDWAYKNGDKTAQELDYIPMPDNVKGVIRTSWKQITDGSGKAVWN HHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]