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The map label for this gene is gfcD [H]

Identifier: 34496229

GI number: 34496229

Start: 796649

End: 799510

Strand: Reverse

Name: gfcD [H]

Synonym: CV_0774

Alternate gene names: 34496229

Gene position: 799510-796649 (Counterclockwise)

Preceding gene: 34496230

Following gene: 34496228

Centisome position: 16.83

GC content: 54.33

Gene sequence:

>2862_bases
ATGCATAAAAAATCCAGGAATGATCTGGTCACAGGGGTGTTGCAAAAAGGGGTTCCACTGCTATTTGCCTGTGGAGCATT
GGCTCAGCCATCATTAAATGGCCAGATTGGCTATATCAATATGCCGTCTGCGCGTGTGGGCGATGACGGCACGATGAGCT
TCGGCTACAGTTATGACAAGCCATACGGCACTCTCTGGACCTCGACCACCATACTGCCCTGGCTTGAGGTGTCGGGGCGC
TACATCTCCATCGCCGGTGCACCAGGCTTTACCGATCAACAATATGGCGGTGGCTACGGTCGCTACAAAGACAAGGCCAT
CGATACTAAATTCCGGCTTGTAGAGGAGACCCGCTGGCTGCCGGAAATTTCACTTGGTTTCACTGACATCCAAGGCACTC
GCCTATGGAAAGGCACGAACCTGATCGCCACTAAGCAAGTTCTCCCAGGTCTGGAGACGACGCTTGGCTACGGCTCGGGC
CGCATTCAAGGCATGTTCGGCGGCCTGCGCTACACCCCTAGCTTTCTACCTAACTGGTCTCTGGTTGCAGAGTACGATGC
CAATAATTACAGCCAAGATCCGCATCCATTTGTAGCACAGACATTTGCGACAGAATATCGAAAAAAGGGTCCTGCCATTG
GCCTGGAATACCAATGGGGCTGGTTAGGGCTTCAAGTCGCTCGCCAGAAAACCCACAATAGCGTGAATGCGCATATCGAC
ATTCCACTGAACGTAACCGAGTTTGTGCCCAAAATTCAGGAGCCTGCTTATTTCACAGGGGGCCCCGACCTCCCGACACG
GCCGACGCTCGATCAATGGAAAGGCGATAGCAGCCGGGCTCGCCAGCTGGCCTCCGCACTGGGCAATCAAGATTTCAAGA
ATATCCGCATCGCCATGCAACGCGATACTTTGGTGATGGAGCTCGGCAATAGCCGGATATCGAACGTCGGCCGTGCAGTC
GGCCGCGCAGTGCGGACCGCACTGTATTACGCTCCGCTGGAAACCCGTGAAATCAAAGTCGTGTATACCGAACTGGAGCA
GCCGGTCGCTACCTATAACTTTTATGATATGACCACGCTCAATCAATATCTGCTGGGCAAGATCAATCGTGAGCGTTTCC
TGCAAACCGTCAACATCAAATCTGGCCGCGACCAAGAGCTTGAGCCGCTGAACAGCCAAACCCTGGCGCAATCACTCCGC
GATGGTATCAATGTCAACCTACTGACCAATCGCGACGGAGATTGGGTTCAAGTTACCAGCGACGATACCGAAGATAACCG
CTTCCATCTGGCCCCCAAGCTGGGCGTCTATTTCAACGATCCTAGCGGTGCCTTCCACTATGACATCATGGCTGAGGCAA
CCTACAAACGACGTTTCAGCAAAGGCTTATACCTAGATAGCGCGTTAAGCGCAGATGTATATAACACCATCACGGCAGTC
AAACAACCATCAAACAGTGATTTGCCTCATGTTCGGTCCGACATAGCGGACTATAAGCGAGTCAAGACACCCAAGCTGAA
CCGCCTATTGTTGAACCAGTACATGACGCTGTCGCCCAATGTCTACGCCCGCGCTTCCGCGGGCATCTATGAAGAAATGT
TCCGCGGTGCTGGCGGTCAGGTTCTGTATTATCCTAGTTTCAACCAAAGCTGGGCGGTAGATTTGGCGGTGGACGCCTTG
CAGCAACGTGATGTCAACGGCTGGTTCGGCAAGCGAGATTACCAAACCGTCACGGCAATTACGTCGCTGCACTACCAGTT
GCCAATGGGTGTCACCACCACCGTCCGCGCCGGACGCTTCCTTGCCAAAGATGATGGCGTACGCTTCGAGCTATCTCGCC
GCTTCCGTTCAGGTGTCGAAGCCGGCTTCTGGTATACCAAGACCAATGGCCATGACATCACCTCTCCGGGCACACCGGAG
AAACCATACAATGACAAAGGGATATTCATCACCATCCCTCTCAATAGTCTGCTGACTTTCGACAGCCGTACCGTCGGCGG
CTTCTCACTGTCGCCCTGGACACGAGATGTCGGCCAAATGGTCATGACTCCAGGCGATCTCTATGACATTCTCAGCAACC
CCAAACGCGATATCCATGCCTACGATGGTCTGGGCAATTTCGCGGAACGCGCCGATGAACAGAATCTGCCACAAGTCACC
TCGCCGCAACCCGACTATACACCTTGGCCAGTGATTCGAATGCGGCTGGAGGACTCCAGCAGTCAATGGCTAGAAATGGA
TAATAAGACTGCAGGGCTAGGGCTCGCGACAATTGCTGTCGCCACTGCCGCAGCCCTGGACAAACGGGTAGACCGCGCAT
TCAAGGACCACCAACAGAATAGCTTAGTAAAGAGTTGGGGCCAAGTTGGAAAGAATTTGCCTATTGCGACCGCTGCCCTT
TCTGGCGCAGCGTTCGCTCTGGGAGATGATCGATTGAGCAACACGGGCCTGATTGCGCTGGAGTCAGCAGGTGTTGCAGT
AGCGGGTAGCGAAATGTTGAAGTTTACCTCCAACCGCGCGCGCCCAGGAGATGACAACGCACCATGGCGTAGCCAGCCTG
CAGGAACATCGCGTTGGCAAAGCAGCTTCACGTCCAATCACACGGCGATACTGTTCGCCACTGTTACACCATTCGCGAAG
GAATACGACCAACCCTGGTTATACGGCATAGCCGCACTCGGCGCCGCAGGCCGACTGGCCAGCCAGGATCATTGGCTGTC
CGACATCACCGCCGGCGGGATCCTAGGCTATGTCGCCGGCAATTGGCTCTGGCAGTCGCAACGCGACAATAGCCGCTATC
AAAGCAATATAGTTGTTACCCCCAAGCAGGTTGGGGTGCAGCTCAACATTCCCATCCAATAA

Upstream 100 bases:

>100_bases
ACCCAGACAAGGGTAGAATAGTTTTTCACCGTCATCGCCAAACTATAAGCTCTGAAATACAGGCAGTGCATCAAAGTTCA
AAATAATCCGGGCCGTGCGA

Downstream 100 bases:

>100_bases
GTATTATAAATTAGGTAATCAAGCATGCGTTTTTTAAAATTGCCTGGAAAATCATTGTTAGCTATGTGCCTGCTACTGGG
CAGCGCCTGCCTTCATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Group 4 capsule protein D homolog [H]

Number of amino acids: Translated: 953; Mature: 953

Protein sequence:

>953_residues
MHKKSRNDLVTGVLQKGVPLLFACGALAQPSLNGQIGYINMPSARVGDDGTMSFGYSYDKPYGTLWTSTTILPWLEVSGR
YISIAGAPGFTDQQYGGGYGRYKDKAIDTKFRLVEETRWLPEISLGFTDIQGTRLWKGTNLIATKQVLPGLETTLGYGSG
RIQGMFGGLRYTPSFLPNWSLVAEYDANNYSQDPHPFVAQTFATEYRKKGPAIGLEYQWGWLGLQVARQKTHNSVNAHID
IPLNVTEFVPKIQEPAYFTGGPDLPTRPTLDQWKGDSSRARQLASALGNQDFKNIRIAMQRDTLVMELGNSRISNVGRAV
GRAVRTALYYAPLETREIKVVYTELEQPVATYNFYDMTTLNQYLLGKINRERFLQTVNIKSGRDQELEPLNSQTLAQSLR
DGINVNLLTNRDGDWVQVTSDDTEDNRFHLAPKLGVYFNDPSGAFHYDIMAEATYKRRFSKGLYLDSALSADVYNTITAV
KQPSNSDLPHVRSDIADYKRVKTPKLNRLLLNQYMTLSPNVYARASAGIYEEMFRGAGGQVLYYPSFNQSWAVDLAVDAL
QQRDVNGWFGKRDYQTVTAITSLHYQLPMGVTTTVRAGRFLAKDDGVRFELSRRFRSGVEAGFWYTKTNGHDITSPGTPE
KPYNDKGIFITIPLNSLLTFDSRTVGGFSLSPWTRDVGQMVMTPGDLYDILSNPKRDIHAYDGLGNFAERADEQNLPQVT
SPQPDYTPWPVIRMRLEDSSSQWLEMDNKTAGLGLATIAVATAAALDKRVDRAFKDHQQNSLVKSWGQVGKNLPIATAAL
SGAAFALGDDRLSNTGLIALESAGVAVAGSEMLKFTSNRARPGDDNAPWRSQPAGTSRWQSSFTSNHTAILFATVTPFAK
EYDQPWLYGIAALGAAGRLASQDHWLSDITAGGILGYVAGNWLWQSQRDNSRYQSNIVVTPKQVGVQLNIPIQ

Sequences:

>Translated_953_residues
MHKKSRNDLVTGVLQKGVPLLFACGALAQPSLNGQIGYINMPSARVGDDGTMSFGYSYDKPYGTLWTSTTILPWLEVSGR
YISIAGAPGFTDQQYGGGYGRYKDKAIDTKFRLVEETRWLPEISLGFTDIQGTRLWKGTNLIATKQVLPGLETTLGYGSG
RIQGMFGGLRYTPSFLPNWSLVAEYDANNYSQDPHPFVAQTFATEYRKKGPAIGLEYQWGWLGLQVARQKTHNSVNAHID
IPLNVTEFVPKIQEPAYFTGGPDLPTRPTLDQWKGDSSRARQLASALGNQDFKNIRIAMQRDTLVMELGNSRISNVGRAV
GRAVRTALYYAPLETREIKVVYTELEQPVATYNFYDMTTLNQYLLGKINRERFLQTVNIKSGRDQELEPLNSQTLAQSLR
DGINVNLLTNRDGDWVQVTSDDTEDNRFHLAPKLGVYFNDPSGAFHYDIMAEATYKRRFSKGLYLDSALSADVYNTITAV
KQPSNSDLPHVRSDIADYKRVKTPKLNRLLLNQYMTLSPNVYARASAGIYEEMFRGAGGQVLYYPSFNQSWAVDLAVDAL
QQRDVNGWFGKRDYQTVTAITSLHYQLPMGVTTTVRAGRFLAKDDGVRFELSRRFRSGVEAGFWYTKTNGHDITSPGTPE
KPYNDKGIFITIPLNSLLTFDSRTVGGFSLSPWTRDVGQMVMTPGDLYDILSNPKRDIHAYDGLGNFAERADEQNLPQVT
SPQPDYTPWPVIRMRLEDSSSQWLEMDNKTAGLGLATIAVATAAALDKRVDRAFKDHQQNSLVKSWGQVGKNLPIATAAL
SGAAFALGDDRLSNTGLIALESAGVAVAGSEMLKFTSNRARPGDDNAPWRSQPAGTSRWQSSFTSNHTAILFATVTPFAK
EYDQPWLYGIAALGAAGRLASQDHWLSDITAGGILGYVAGNWLWQSQRDNSRYQSNIVVTPKQVGVQLNIPIQ
>Mature_953_residues
MHKKSRNDLVTGVLQKGVPLLFACGALAQPSLNGQIGYINMPSARVGDDGTMSFGYSYDKPYGTLWTSTTILPWLEVSGR
YISIAGAPGFTDQQYGGGYGRYKDKAIDTKFRLVEETRWLPEISLGFTDIQGTRLWKGTNLIATKQVLPGLETTLGYGSG
RIQGMFGGLRYTPSFLPNWSLVAEYDANNYSQDPHPFVAQTFATEYRKKGPAIGLEYQWGWLGLQVARQKTHNSVNAHID
IPLNVTEFVPKIQEPAYFTGGPDLPTRPTLDQWKGDSSRARQLASALGNQDFKNIRIAMQRDTLVMELGNSRISNVGRAV
GRAVRTALYYAPLETREIKVVYTELEQPVATYNFYDMTTLNQYLLGKINRERFLQTVNIKSGRDQELEPLNSQTLAQSLR
DGINVNLLTNRDGDWVQVTSDDTEDNRFHLAPKLGVYFNDPSGAFHYDIMAEATYKRRFSKGLYLDSALSADVYNTITAV
KQPSNSDLPHVRSDIADYKRVKTPKLNRLLLNQYMTLSPNVYARASAGIYEEMFRGAGGQVLYYPSFNQSWAVDLAVDAL
QQRDVNGWFGKRDYQTVTAITSLHYQLPMGVTTTVRAGRFLAKDDGVRFELSRRFRSGVEAGFWYTKTNGHDITSPGTPE
KPYNDKGIFITIPLNSLLTFDSRTVGGFSLSPWTRDVGQMVMTPGDLYDILSNPKRDIHAYDGLGNFAERADEQNLPQVT
SPQPDYTPWPVIRMRLEDSSSQWLEMDNKTAGLGLATIAVATAAALDKRVDRAFKDHQQNSLVKSWGQVGKNLPIATAAL
SGAAFALGDDRLSNTGLIALESAGVAVAGSEMLKFTSNRARPGDDNAPWRSQPAGTSRWQSSFTSNHTAILFATVTPFAK
EYDQPWLYGIAALGAAGRLASQDHWLSDITAGGILGYVAGNWLWQSQRDNSRYQSNIVVTPKQVGVQLNIPIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787219, Length=701, Percent_Identity=26.1055634807418, Blast_Score=180, Evalue=4e-46,
Organism=Escherichia coli, GI1790461, Length=715, Percent_Identity=25.5944055944056, Blast_Score=166, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 105833; Mature: 105833

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKKSRNDLVTGVLQKGVPLLFACGALAQPSLNGQIGYINMPSARVGDDGTMSFGYSYDK
CCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCC
PYGTLWTSTTILPWLEVSGRYISIAGAPGFTDQQYGGGYGRYKDKAIDTKFRLVEETRWL
CCCEEEECCEEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCC
PEISLGFTDIQGTRLWKGTNLIATKQVLPGLETTLGYGSGRIQGMFGGLRYTPSFLPNWS
CCCCCCEEECCCCEEECCCCEEEHHHHCCCHHHHHCCCCCEEEEEECCCEECCCCCCCCC
LVAEYDANNYSQDPHPFVAQTFATEYRKKGPAIGLEYQWGWLGLQVARQKTHNSVNAHID
EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEE
IPLNVTEFVPKIQEPAYFTGGPDLPTRPTLDQWKGDSSRARQLASALGNQDFKNIRIAMQ
ECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEE
RDTLVMELGNSRISNVGRAVGRAVRTALYYAPLETREIKVVYTELEQPVATYNFYDMTTL
CCEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCHHEEEEEEHHHH
NQYLLGKINRERFLQTVNIKSGRDQELEPLNSQTLAQSLRDGINVNLLTNRDGDWVQVTS
HHHHHHHCCHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEC
DDTEDNRFHLAPKLGVYFNDPSGAFHYDIMAEATYKRRFSKGLYLDSALSADVYNTITAV
CCCCCCEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCEECHHHCHHHHHHHHHH
KQPSNSDLPHVRSDIADYKRVKTPKLNRLLLNQYMTLSPNVYARASAGIYEEMFRGAGGQ
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCEEEECCCCHHHHHHCCCCCC
VLYYPSFNQSWAVDLAVDALQQRDVNGWFGKRDYQTVTAITSLHYQLPMGVTTTVRAGRF
EEEECCCCCCEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEHHHCCEE
LAKDDGVRFELSRRFRSGVEAGFWYTKTNGHDITSPGTPEKPYNDKGIFITIPLNSLLTF
EECCCCCEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHEEE
DSRTVGGFSLSPWTRDVGQMVMTPGDLYDILSNPKRDIHAYDGLGNFAERADEQNLPQVT
CCCCCCCEECCCHHHHHHHHHCCCCHHHHHHCCCCCCEEHHCCCCHHHHHCCCCCCCCCC
SPQPDYTPWPVIRMRLEDSSSQWLEMDNKTAGLGLATIAVATAAALDKRVDRAFKDHQQN
CCCCCCCCCCEEEEEECCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVKSWGQVGKNLPIATAALSGAAFALGDDRLSNTGLIALESAGVAVAGSEMLKFTSNRA
HHHHHHHHHCCCCCEEHHHHCCCEEEECCCCCCCCCEEEEECCCEEEECHHHHHHHCCCC
RPGDDNAPWRSQPAGTSRWQSSFTSNHTAILFATVTPFAKEYDQPWLYGIAALGAAGRLA
CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHCCCCC
SQDHWLSDITAGGILGYVAGNWLWQSQRDNSRYQSNIVVTPKQVGVQLNIPIQ
CCCCHHHHHHCCCCHHHHHCCEEEECCCCCCHHHCCEEEEHHHHCEEEECCCC
>Mature Secondary Structure
MHKKSRNDLVTGVLQKGVPLLFACGALAQPSLNGQIGYINMPSARVGDDGTMSFGYSYDK
CCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCC
PYGTLWTSTTILPWLEVSGRYISIAGAPGFTDQQYGGGYGRYKDKAIDTKFRLVEETRWL
CCCEEEECCEEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCC
PEISLGFTDIQGTRLWKGTNLIATKQVLPGLETTLGYGSGRIQGMFGGLRYTPSFLPNWS
CCCCCCEEECCCCEEECCCCEEEHHHHCCCHHHHHCCCCCEEEEEECCCEECCCCCCCCC
LVAEYDANNYSQDPHPFVAQTFATEYRKKGPAIGLEYQWGWLGLQVARQKTHNSVNAHID
EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEE
IPLNVTEFVPKIQEPAYFTGGPDLPTRPTLDQWKGDSSRARQLASALGNQDFKNIRIAMQ
ECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEE
RDTLVMELGNSRISNVGRAVGRAVRTALYYAPLETREIKVVYTELEQPVATYNFYDMTTL
CCEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCHHEEEEEEHHHH
NQYLLGKINRERFLQTVNIKSGRDQELEPLNSQTLAQSLRDGINVNLLTNRDGDWVQVTS
HHHHHHHCCHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEC
DDTEDNRFHLAPKLGVYFNDPSGAFHYDIMAEATYKRRFSKGLYLDSALSADVYNTITAV
CCCCCCEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCEECHHHCHHHHHHHHHH
KQPSNSDLPHVRSDIADYKRVKTPKLNRLLLNQYMTLSPNVYARASAGIYEEMFRGAGGQ
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCEEEECCCCHHHHHHCCCCCC
VLYYPSFNQSWAVDLAVDALQQRDVNGWFGKRDYQTVTAITSLHYQLPMGVTTTVRAGRF
EEEECCCCCCEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEHHHCCEE
LAKDDGVRFELSRRFRSGVEAGFWYTKTNGHDITSPGTPEKPYNDKGIFITIPLNSLLTF
EECCCCCEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHEEE
DSRTVGGFSLSPWTRDVGQMVMTPGDLYDILSNPKRDIHAYDGLGNFAERADEQNLPQVT
CCCCCCCEECCCHHHHHHHHHCCCCHHHHHHCCCCCCEEHHCCCCHHHHHCCCCCCCCCC
SPQPDYTPWPVIRMRLEDSSSQWLEMDNKTAGLGLATIAVATAAALDKRVDRAFKDHQQN
CCCCCCCCCCEEEEEECCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVKSWGQVGKNLPIATAALSGAAFALGDDRLSNTGLIALESAGVAVAGSEMLKFTSNRA
HHHHHHHHHCCCCCEEHHHHCCCEEEECCCCCCCCCEEEEECCCEEEECHHHHHHHCCCC
RPGDDNAPWRSQPAGTSRWQSSFTSNHTAILFATVTPFAKEYDQPWLYGIAALGAAGRLA
CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHCCCCC
SQDHWLSDITAGGILGYVAGNWLWQSQRDNSRYQSNIVVTPKQVGVQLNIPIQ
CCCCHHHHHHCCCCHHHHHCCEEEECCCCCCHHHCCEEEEHHHHCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]