| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496179
Identifier: 34496179
GI number: 34496179
Start: 749400
End: 749720
Strand: Reverse
Name: 34496179
Synonym: CV_0724
Alternate gene names: NA
Gene position: 749720-749400 (Counterclockwise)
Preceding gene: 34496180
Following gene: 34496178
Centisome position: 15.78
GC content: 65.11
Gene sequence:
>321_bases ATGTCCTTCCCGACCTCCGTCAACGACCAGATCACCGACGCCGTCACCCAGGCCAACGTCAAGGTGCTGGCCGAAGCCCC CGCCATGGCGATGGGCTCGATCTACCAGAGCATGGCCCACTCCACCGGCATCCTGTTCCAGAACGCCGTCTCGGCCCAGC AGCAGCAGAACACGCTGGCCCAGGCCGCCGCCAACATGGGCGTGATGCAGATTTACAGCATGGACACCATGGCCGGCGCC GCCGGCACCGAGAAAATGGCGCAGGGCGGCATCGCCGACAATCTGACCAGCCTGCTCACCGTGCTGCAGTCGTTCCGTTG A
Upstream 100 bases:
>100_bases TGCCCCGCCGTCCAAGCAGTAGCACCGGGACATGGCGTCCGCGCCGGCCGCCATGCCCGACGGTGCGCCTGACCAACACA CCGCACTCGAGGAGCCAAGC
Downstream 100 bases:
>100_bases TTCCCGCCTCATCCGCGATAGGAGCTAGAAAATGGCTTACAACACCGCCGTAAACGATCAGATCACCGACGCCGTCACCC AGACCAACGTCAAGGTGCTG
Product: RebB like protein
Products: NA
Alternate protein names: RebB Like Protein; R Body Protein RebB-Like Protein; R Body Protein; RebA Protein
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSFPTSVNDQITDAVTQANVKVLAEAPAMAMGSIYQSMAHSTGILFQNAVSAQQQQNTLAQAAANMGVMQIYSMDTMAGA AGTEKMAQGGIADNLTSLLTVLQSFR
Sequences:
>Translated_106_residues MSFPTSVNDQITDAVTQANVKVLAEAPAMAMGSIYQSMAHSTGILFQNAVSAQQQQNTLAQAAANMGVMQIYSMDTMAGA AGTEKMAQGGIADNLTSLLTVLQSFR >Mature_105_residues SFPTSVNDQITDAVTQANVKVLAEAPAMAMGSIYQSMAHSTGILFQNAVSAQQQQNTLAQAAANMGVMQIYSMDTMAGAA GTEKMAQGGIADNLTSLLTVLQSFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11076; Mature: 10945
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPTSVNDQITDAVTQANVKVLAEAPAMAMGSIYQSMAHSTGILFQNAVSAQQQQNTLA CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAAANMGVMQIYSMDTMAGAAGTEKMAQGGIADNLTSLLTVLQSFR HHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SFPTSVNDQITDAVTQANVKVLAEAPAMAMGSIYQSMAHSTGILFQNAVSAQQQQNTLA CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAAANMGVMQIYSMDTMAGAAGTEKMAQGGIADNLTSLLTVLQSFR HHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA