| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496102
Identifier: 34496102
GI number: 34496102
Start: 677556
End: 678281
Strand: Reverse
Name: 34496102
Synonym: CV_0647
Alternate gene names: NA
Gene position: 678281-677556 (Counterclockwise)
Preceding gene: 34496103
Following gene: 34496101
Centisome position: 14.28
GC content: 64.19
Gene sequence:
>726_bases ATGCATATCCAGAACCCCCACACCCAAGAAACCGTCGCTTTCGCCGTGGCCGGCCTGACGGAACGCCTGGCCGCTTTCGA GCAAGACCTGAACGCCTGGCAATCGCTGGCCGACAACGCCGCGCGCCGCGTTCAAACCGCCGAGGCGCTACGCAGCGAAG CCGAGCAGGCGCGCAAGGATTGCCGCCAGGCGATGCGCTCGAGCTTGGGCATTCCCACCAAGGCGGTGCGCGAGCTGAAA GGCAAGGAAATGGCCAATCTGGAATTGGCCGAGGAAACGCTGAAGATCGCCGAGGAAGAAAAGATTCTGGCGGAAATGCA GCAGGAGACGCTGTTCGAACAGCGCCAAACCCTGGTCAAGGAACGCGACGCGCTGCGCCGCCAGTATTGGGACGCGGTGC TGGACGACCAAATCGCCCAATGGGGGCAACAGCTGCCGGTCTTGGCCCTGCTGCTGGAGCAAGCCCCCAAGACGTGCATC GAGCGGCTGTTCGGCCGCGCCGAGCTGCGCAGAAATCACGAAGAATTCTTTGCCGCGCAGCTGCCCGGCGAGCTGCAACA GGCGCTGCAAACCGCTCCCCAGGCGGAGCCGGACGCATTGCTGGCCCTGCTTAGCCAACCGCTGCCGCCGCTGGCAACGC CGGCCAGCCAGCACCACAACCCCATCGCCCGCATGCGCTATCAAGCCGAACGCGACGAGCAATACCAAGCCCTGATCAAC CGTTAA
Upstream 100 bases:
>100_bases AAGCGTGGCCTGGCTGTCGTCTGAAATCGATGTCTGGATGGCTGGACGCATCGCGGCGCGCCACGCCTAAAACCCCAATC AACGCACCCGGACTCAGAAC
Downstream 100 bases:
>100_bases GCGAGACCGCCATCATGCAAAACACGACCCGCCAAGCCCTGGACCACTTCATCGGCCGCTACTTCAGCCATATGGACGCG CACCAAGCTCAGGACAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MHIQNPHTQETVAFAVAGLTERLAAFEQDLNAWQSLADNAARRVQTAEALRSEAEQARKDCRQAMRSSLGIPTKAVRELK GKEMANLELAEETLKIAEEEKILAEMQQETLFEQRQTLVKERDALRRQYWDAVLDDQIAQWGQQLPVLALLLEQAPKTCI ERLFGRAELRRNHEEFFAAQLPGELQQALQTAPQAEPDALLALLSQPLPPLATPASQHHNPIARMRYQAERDEQYQALIN R
Sequences:
>Translated_241_residues MHIQNPHTQETVAFAVAGLTERLAAFEQDLNAWQSLADNAARRVQTAEALRSEAEQARKDCRQAMRSSLGIPTKAVRELK GKEMANLELAEETLKIAEEEKILAEMQQETLFEQRQTLVKERDALRRQYWDAVLDDQIAQWGQQLPVLALLLEQAPKTCI ERLFGRAELRRNHEEFFAAQLPGELQQALQTAPQAEPDALLALLSQPLPPLATPASQHHNPIARMRYQAERDEQYQALIN R >Mature_241_residues MHIQNPHTQETVAFAVAGLTERLAAFEQDLNAWQSLADNAARRVQTAEALRSEAEQARKDCRQAMRSSLGIPTKAVRELK GKEMANLELAEETLKIAEEEKILAEMQQETLFEQRQTLVKERDALRRQYWDAVLDDQIAQWGQQLPVLALLLEQAPKTCI ERLFGRAELRRNHEEFFAAQLPGELQQALQTAPQAEPDALLALLSQPLPPLATPASQHHNPIARMRYQAERDEQYQALIN R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27419; Mature: 27419
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIQNPHTQETVAFAVAGLTERLAAFEQDLNAWQSLADNAARRVQTAEALRSEAEQARKD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRQAMRSSLGIPTKAVRELKGKEMANLELAEETLKIAEEEKILAEMQQETLFEQRQTLVK HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERDALRRQYWDAVLDDQIAQWGQQLPVLALLLEQAPKTCIERLFGRAELRRNHEEFFAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGELQQALQTAPQAEPDALLALLSQPLPPLATPASQHHNPIARMRYQAERDEQYQALIN CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure MHIQNPHTQETVAFAVAGLTERLAAFEQDLNAWQSLADNAARRVQTAEALRSEAEQARKD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRQAMRSSLGIPTKAVRELKGKEMANLELAEETLKIAEEEKILAEMQQETLFEQRQTLVK HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERDALRRQYWDAVLDDQIAQWGQQLPVLALLLEQAPKTCIERLFGRAELRRNHEEFFAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGELQQALQTAPQAEPDALLALLSQPLPPLATPASQHHNPIARMRYQAERDEQYQALIN CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA