| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496024
Identifier: 34496024
GI number: 34496024
Start: 609373
End: 610116
Strand: Reverse
Name: 34496024
Synonym: CV_0569
Alternate gene names: NA
Gene position: 610116-609373 (Counterclockwise)
Preceding gene: 34496025
Following gene: 34496023
Centisome position: 12.84
GC content: 59.14
Gene sequence:
>744_bases ATGAAATCATTCAAGAATCTGGCAGGCCGCGCGCTGGCCTTCATCGATCCCATCGTGGTGCTGTCCTTTCTGATCCTGGT CGCGGCGATCGCATCCAACCTGACCTCGTATAAAGTCATTCAGGTGTTCGGCACCGAGGCCAGCCTGGGCACCTTCACCA TGCCCATCATCCTGATGCTGCTCAATCCCATCGCCGAGGTATACGGCAAGAAACGCTCCAACCAGATCCTGTTCGCCACC TGCCTGGCCGAGATCCTGTTCGCGGTGTCCTTCACCGCGCTCAGCCAGTCGCAGCGCGACTGCGGCCTGCTGCCCCTGGC CGAACGCGGCCACTGCGAGGCGCTGAACCAGAGCTACGTGCTGATCAGCGAGCACATCGTGCGGGGCTCGATCTCGTTCG CGATCGGTTGCCTGATCGGCAGCCAGCTCAATACCCGCTTCCTGCTGTATCTGAAGAGCCTGTGGTCCAGCCGGCTGTAT TTCATCCGCGACATTTTCTCGTCGGTAATCGGCGAAGTGGTCTATACCGCCATCTGCTTCATGATCGCCTTCTACGGCGT GTTTCCCTTCGCCACCATCCTGAAGATCTTCGCCTTCAGCCTGATGTTCAAGTTCTCGTCCACCGTGATCCTGTCCTGGA TCTCGCAATACATCGTGCTGCTGCTGTACCGCTACCAGGCCTGGAGCGAGGGCGCGCCCGGCGGCCGCAAGGTCAAATTC TCCTCACGCTATCTGCAAGTATGA
Upstream 100 bases:
>100_bases GCGGCCGCCTGGTCTACCCCGACCATGGCGCGCTGAGCCTGGAAGACAGCGGCCGCTCCGCCATCGGCGCGGTCGCCGGC ATTCTTTTCCGGAAAAACGC
Downstream 100 bases:
>100_bases ATAAGATCCGACTGCACTCCGTCCCCGCGCCGGCCGATGGCCGCCAAACGCCGCTGTTCGCGCTGCGCTGCAATTACGAT TACAGCGGCAAGTACGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKSFKNLAGRALAFIDPIVVLSFLILVAAIASNLTSYKVIQVFGTEASLGTFTMPIILMLLNPIAEVYGKKRSNQILFAT CLAEILFAVSFTALSQSQRDCGLLPLAERGHCEALNQSYVLISEHIVRGSISFAIGCLIGSQLNTRFLLYLKSLWSSRLY FIRDIFSSVIGEVVYTAICFMIAFYGVFPFATILKIFAFSLMFKFSSTVILSWISQYIVLLLYRYQAWSEGAPGGRKVKF SSRYLQV
Sequences:
>Translated_247_residues MKSFKNLAGRALAFIDPIVVLSFLILVAAIASNLTSYKVIQVFGTEASLGTFTMPIILMLLNPIAEVYGKKRSNQILFAT CLAEILFAVSFTALSQSQRDCGLLPLAERGHCEALNQSYVLISEHIVRGSISFAIGCLIGSQLNTRFLLYLKSLWSSRLY FIRDIFSSVIGEVVYTAICFMIAFYGVFPFATILKIFAFSLMFKFSSTVILSWISQYIVLLLYRYQAWSEGAPGGRKVKF SSRYLQV >Mature_247_residues MKSFKNLAGRALAFIDPIVVLSFLILVAAIASNLTSYKVIQVFGTEASLGTFTMPIILMLLNPIAEVYGKKRSNQILFAT CLAEILFAVSFTALSQSQRDCGLLPLAERGHCEALNQSYVLISEHIVRGSISFAIGCLIGSQLNTRFLLYLKSLWSSRLY FIRDIFSSVIGEVVYTAICFMIAFYGVFPFATILKIFAFSLMFKFSSTVILSWISQYIVLLLYRYQAWSEGAPGGRKVKF SSRYLQV
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27609; Mature: 27609
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFKNLAGRALAFIDPIVVLSFLILVAAIASNLTSYKVIQVFGTEASLGTFTMPIILML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCHHHHHHHHHHH LNPIAEVYGKKRSNQILFATCLAEILFAVSFTALSQSQRDCGLLPLAERGHCEALNQSYV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHH LISEHIVRGSISFAIGCLIGSQLNTRFLLYLKSLWSSRLYFIRDIFSSVIGEVVYTAICF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIAFYGVFPFATILKIFAFSLMFKFSSTVILSWISQYIVLLLYRYQAWSEGAPGGRKVKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE SSRYLQV CCCCCCC >Mature Secondary Structure MKSFKNLAGRALAFIDPIVVLSFLILVAAIASNLTSYKVIQVFGTEASLGTFTMPIILML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCHHHHHHHHHHH LNPIAEVYGKKRSNQILFATCLAEILFAVSFTALSQSQRDCGLLPLAERGHCEALNQSYV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHH LISEHIVRGSISFAIGCLIGSQLNTRFLLYLKSLWSSRLYFIRDIFSSVIGEVVYTAICF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIAFYGVFPFATILKIFAFSLMFKFSSTVILSWISQYIVLLLYRYQAWSEGAPGGRKVKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE SSRYLQV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA