| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496022
Identifier: 34496022
GI number: 34496022
Start: 607596
End: 608051
Strand: Reverse
Name: 34496022
Synonym: CV_0567
Alternate gene names: NA
Gene position: 608051-607596 (Counterclockwise)
Preceding gene: 34496023
Following gene: 34496020
Centisome position: 12.8
GC content: 66.67
Gene sequence:
>456_bases GTGAGCGCCCTCACCATCGAAGACATCGACGCCGACGCGATCACGATACGGCTGGTCAACACCGCCAAGACTTATCTCGT CCCGCTGGACCGGGTAATCCGCTTGCAATGCCTGCAGGGCCTGCCGCGGGACGAGATCCTGCTGGCCGGGGTGGTGGCCG GCAAGGTGGCGCGCAGGCGCCCCGCCCTGCTGGCGCAGTACGATTTCTCGGATGTCGCCGTCTGCGGCGATTTCCGGCCG CAGCACGTGGTGTTCGACCGCAGCGTCGGTTTCGTCGCCGGCGGCGAAACCCGGGTCGACCTGCCGTTCCGCGAACTGCT GGGCAATCTGGACGCGATCTCGCGGCTCAGCGACGAGGCGGCGTTCTACCTGGGCTTCAGCTACGCGCTGTTCGCGCTGC CGGGCGAAGAACTGTCCTTCGGCGATCATCCCCGCCCCTACCTGAAGCTGAAATAG
Upstream 100 bases:
>100_bases TGGCGACCACCCGGGTGGGCAGCACGCTGAGCGCGCGCTCCAGCCCGCAGTTGGAGCAGAGCGAACTGGAAGCCAAGGCT TCGCTGATCCTGGGTGTATT
Downstream 100 bases:
>100_bases CCGCTCAGAAGCCCAGGCCGCTGTCGGCCTGGGCGCGCCGCCAGTCGAACCAGGGACCGGGATCGGTCTTGCGCCCCGGC GCGATGTGCTCGTGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSALTIEDIDADAITIRLVNTAKTYLVPLDRVIRLQCLQGLPRDEILLAGVVAGKVARRRPALLAQYDFSDVAVCGDFRP QHVVFDRSVGFVAGGETRVDLPFRELLGNLDAISRLSDEAAFYLGFSYALFALPGEELSFGDHPRPYLKLK
Sequences:
>Translated_151_residues MSALTIEDIDADAITIRLVNTAKTYLVPLDRVIRLQCLQGLPRDEILLAGVVAGKVARRRPALLAQYDFSDVAVCGDFRP QHVVFDRSVGFVAGGETRVDLPFRELLGNLDAISRLSDEAAFYLGFSYALFALPGEELSFGDHPRPYLKLK >Mature_150_residues SALTIEDIDADAITIRLVNTAKTYLVPLDRVIRLQCLQGLPRDEILLAGVVAGKVARRRPALLAQYDFSDVAVCGDFRPQ HVVFDRSVGFVAGGETRVDLPFRELLGNLDAISRLSDEAAFYLGFSYALFALPGEELSFGDHPRPYLKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16681; Mature: 16550
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALTIEDIDADAITIRLVNTAKTYLVPLDRVIRLQCLQGLPRDEILLAGVVAGKVARRR CCCEEEECCCCCEEEEEEECCCCEEEECHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCC PALLAQYDFSDVAVCGDFRPQHVVFDRSVGFVAGGETRVDLPFRELLGNLDAISRLSDEA CCEEEEECCCCEEEECCCCCCEEEEECCCCEEECCCEEECCCHHHHHCCHHHHHHHCCCC AFYLGFSYALFALPGEELSFGDHPRPYLKLK EEEEEHEEEEEECCCCCCCCCCCCCCEEEEC >Mature Secondary Structure SALTIEDIDADAITIRLVNTAKTYLVPLDRVIRLQCLQGLPRDEILLAGVVAGKVARRR CCEEEECCCCCEEEEEEECCCCEEEECHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCC PALLAQYDFSDVAVCGDFRPQHVVFDRSVGFVAGGETRVDLPFRELLGNLDAISRLSDEA CCEEEEECCCCEEEECCCCCCEEEEECCCCEEECCCEEECCCHHHHHCCHHHHHHHCCCC AFYLGFSYALFALPGEELSFGDHPRPYLKLK EEEEEHEEEEEECCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA