| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34495924
Identifier: 34495924
GI number: 34495924
Start: 490112
End: 490447
Strand: Reverse
Name: 34495924
Synonym: CV_0469
Alternate gene names: NA
Gene position: 490447-490112 (Counterclockwise)
Preceding gene: 34495925
Following gene: 34495922
Centisome position: 10.32
GC content: 66.07
Gene sequence:
>336_bases ATGCTGGATACGCTGAGCAGCGAGGATTTCGCGCCTCTGATCGGGCAATGCTGCCGCTTCCATGCGGCGCCGTGGCCGGA AGTGGAGTTGCAGGTGCAGTCGATACGGCAGAAGCCCCTGTCCCAAGTGCCGGGACGGGAAGGCACCGAGCGCACTCCGT TCGTGGTGGAGCTGGTCGCCACCGCGAATACGGAGCTGGTCGACGCCGTCGGCCAGCTGCAACTGCCGGCGGCTGGCGAA TCGCCGGCCCGCACGCTGGATGATGTGTGGATCAGCCGCACCGGCGCGATGGGCCGCGACCGGCGGTATTGCTATTTCCA GCTGCCATTCAACTGA
Upstream 100 bases:
>100_bases CTGCATCGCGGTCCAAGGCCTGTTCCCGACTCGACAATAAACAGCAACACGCCGGCGGAGCGCATCGGCCCCGCCGGCTT CGCCATACAAGGGGAATATC
Downstream 100 bases:
>100_bases CGGCGTCCCGGGCGGACGCCGTCCGCCCCCGCGCAACCGGGAACGCCGGCCTCAGCCGGCCCCAACCATCACCCGCGACC CTTGCGGGTGCCACACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MLDTLSSEDFAPLIGQCCRFHAAPWPEVELQVQSIRQKPLSQVPGREGTERTPFVVELVATANTELVDAVGQLQLPAAGE SPARTLDDVWISRTGAMGRDRRYCYFQLPFN
Sequences:
>Translated_111_residues MLDTLSSEDFAPLIGQCCRFHAAPWPEVELQVQSIRQKPLSQVPGREGTERTPFVVELVATANTELVDAVGQLQLPAAGE SPARTLDDVWISRTGAMGRDRRYCYFQLPFN >Mature_111_residues MLDTLSSEDFAPLIGQCCRFHAAPWPEVELQVQSIRQKPLSQVPGREGTERTPFVVELVATANTELVDAVGQLQLPAAGE SPARTLDDVWISRTGAMGRDRRYCYFQLPFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12363; Mature: 12363
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTLSSEDFAPLIGQCCRFHAAPWPEVELQVQSIRQKPLSQVPGREGTERTPFVVELVA CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEC TANTELVDAVGQLQLPAAGESPARTLDDVWISRTGAMGRDRRYCYFQLPFN CCCCHHHHHHCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MLDTLSSEDFAPLIGQCCRFHAAPWPEVELQVQSIRQKPLSQVPGREGTERTPFVVELVA CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEC TANTELVDAVGQLQLPAAGESPARTLDDVWISRTGAMGRDRRYCYFQLPFN CCCCHHHHHHCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA