Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is slyX

Identifier: 34495910

GI number: 34495910

Start: 471590

End: 471817

Strand: Reverse

Name: slyX

Synonym: CV_0455

Alternate gene names: 34495910

Gene position: 471817-471590 (Counterclockwise)

Preceding gene: 34495911

Following gene: 34495909

Centisome position: 9.93

GC content: 65.79

Gene sequence:

>228_bases
ATGGCGGGCATGAACACCGAAAACGAAAACCGCGTCGAGGCGCTGGAAGTGCGCCTCGCCTTCCAGGACGAGCTGCTGGA
CGCGCTGAACGCCACCGTCGCGCGCCAGCAGAAGGAAATCGACCTGCTGCAGCAGCAGATCCGCCTGCTGTACCAGCAGT
TCAGAAACGCGCAGCCGGACGACGCGCCCGGCGGTTCGCTGCGCGACGACATCCCGCCGCACTACTGA

Upstream 100 bases:

>100_bases
GGCCAGCACGACCACATCCGCGACACGGTGATCCCCACCTTCCTGCACTTCAACCTGCCGCTGATGACCGCCGGCTGGAT
CGCGGCGATGGTGTTGTAGA

Downstream 100 bases:

>100_bases
GCGCGCTCCCGCTCTCGGCAATGCCGGCAGGCGCATCCCGCGCCGCCGGCCGCCCTCCGCCGTCTCCTGCCGCCTGACGA
ACGCCGCCGCATGCCCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MAGMNTENENRVEALEVRLAFQDELLDALNATVARQQKEIDLLQQQIRLLYQQFRNAQPDDAPGGSLRDDIPPHY

Sequences:

>Translated_75_residues
MAGMNTENENRVEALEVRLAFQDELLDALNATVARQQKEIDLLQQQIRLLYQQFRNAQPDDAPGGSLRDDIPPHY
>Mature_74_residues
AGMNTENENRVEALEVRLAFQDELLDALNATVARQQKEIDLLQQQIRLLYQQFRNAQPDDAPGGSLRDDIPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SLYX_CHRVO (Q7P0W0)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_900125.1
- GeneID:   2550715
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_0455
- NMPDR:   fig|243365.1.peg.455
- HOGENOM:   HBG700945
- OMA:   QFRALYQ
- ProtClustDB:   PRK04325
- BioCyc:   CVIO243365:CV_0455-MONOMER
- HAMAP:   MF_00715
- InterPro:   IPR007236

Pfam domain/function: PF04102 SlyX

EC number: NA

Molecular weight: Translated: 8594; Mature: 8462

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGMNTENENRVEALEVRLAFQDELLDALNATVARQQKEIDLLQQQIRLLYQQFRNAQPD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAPGGSLRDDIPPHY
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGMNTENENRVEALEVRLAFQDELLDALNATVARQQKEIDLLQQQIRLLYQQFRNAQPD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAPGGSLRDDIPPHY
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782