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The map label for this gene is vacJ [C]

Identifier: 34495899

GI number: 34495899

Start: 462755

End: 463573

Strand: Reverse

Name: vacJ [C]

Synonym: CV_0444

Alternate gene names: 34495899

Gene position: 463573-462755 (Counterclockwise)

Preceding gene: 34495900

Following gene: 34495898

Centisome position: 9.76

GC content: 66.91

Gene sequence:

>819_bases
ATGCGCCCCGCCAAACTCCTGGCCGCCGCCAGCCTGCTGGCTCTGGCCGGCTGCGCCAGCCACCCCACCGCCGCCTACGA
CCCGTACGAGCCGTACAACCGCGCGATGTTCACTGTCAACGACAAGGCGGACCAGTGGGTGCTGAAGCCGGCGGCGCAAG
GCTACCAGGCCGTGGTGCCGTCGCCGATCCGCACCGGCGTCAGCAACTTCTTCGACAACCTGAAGGACGTCTACAGCTTC
GCGTTCAACGTCCTGCGCGCCGACCCGGAAAAGGCCGCCAACGACTTCATGCGCGTGGCGATGAACACCGGCTTCGGCCT
GTTCGGCCTGATCGACATCGCCGATCAAGCCGGCCTGAAGAACAACAAAACCACGCTGGGCGACGTGATGGCCTCCTGGG
GCTGGAAGAGCAGCAACTATTTCGTGATGCCCTTCTTCGGTCCGTCCACGGTGCGCGACAGCACCGGCCTGGCCACCTCG
CTGGTCGGTCCCGGACCGGAGAAGCTGGTCTACCACAACACCAACGAGGCGATCGCCTTCTACGGCGTCTACGGCGTCAG
CACCCGCGCCAAGTATCTGGGCGCGGAGAACGTGCTGGACACCGCCGCGGTGGACCGCTACAGCTACACCCGCGACTTGT
ACATGCAGATGCGGGCCAAGCAGCTGGGCCAGCCGGATCCGACCCAGCCGGTGGACAACTTCAATCTGGACGATCTGATG
AGCGGCGGCGACAGCTCCGCCCCGGCGGCGGAGCGCAAAGCCGCCCCGGCGGAAGCTTCCGCGCCCGCTGCGGCCATCGC
CGCGTCGGCCGCGCAATAA

Upstream 100 bases:

>100_bases
GCGCCGGCCACGCGCTGACGCTGTCCGGCATCCCCGCCGGCCTGGCCACGCTGGCCGGCTTGTACAATCTCGAACCTTTG
CTTCGCGCTGGAGACTGACC

Downstream 100 bases:

>100_bases
GCCGCCGGCAAGATCGCCAAGCCGCTGCCGTCCCGAGGGACGGCAGCGTTTGTTTTTTCATTAGACAGGAATCGCCATGA
GCCAAATGCCCGCCTGTCCG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRPAKLLAAASLLALAGCASHPTAAYDPYEPYNRAMFTVNDKADQWVLKPAAQGYQAVVPSPIRTGVSNFFDNLKDVYSF
AFNVLRADPEKAANDFMRVAMNTGFGLFGLIDIADQAGLKNNKTTLGDVMASWGWKSSNYFVMPFFGPSTVRDSTGLATS
LVGPGPEKLVYHNTNEAIAFYGVYGVSTRAKYLGAENVLDTAAVDRYSYTRDLYMQMRAKQLGQPDPTQPVDNFNLDDLM
SGGDSSAPAAERKAAPAEASAPAAAIAASAAQ

Sequences:

>Translated_272_residues
MRPAKLLAAASLLALAGCASHPTAAYDPYEPYNRAMFTVNDKADQWVLKPAAQGYQAVVPSPIRTGVSNFFDNLKDVYSF
AFNVLRADPEKAANDFMRVAMNTGFGLFGLIDIADQAGLKNNKTTLGDVMASWGWKSSNYFVMPFFGPSTVRDSTGLATS
LVGPGPEKLVYHNTNEAIAFYGVYGVSTRAKYLGAENVLDTAAVDRYSYTRDLYMQMRAKQLGQPDPTQPVDNFNLDDLM
SGGDSSAPAAERKAAPAEASAPAAAIAASAAQ
>Mature_272_residues
MRPAKLLAAASLLALAGCASHPTAAYDPYEPYNRAMFTVNDKADQWVLKPAAQGYQAVVPSPIRTGVSNFFDNLKDVYSF
AFNVLRADPEKAANDFMRVAMNTGFGLFGLIDIADQAGLKNNKTTLGDVMASWGWKSSNYFVMPFFGPSTVRDSTGLATS
LVGPGPEKLVYHNTNEAIAFYGVYGVSTRAKYLGAENVLDTAAVDRYSYTRDLYMQMRAKQLGQPDPTQPVDNFNLDDLM
SGGDSSAPAAERKAAPAEASAPAAAIAASAAQ

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=217, Percent_Identity=30.8755760368664, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 29121; Mature: 29121

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAKLLAAASLLALAGCASHPTAAYDPYEPYNRAMFTVNDKADQWVLKPAAQGYQAVVP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECHHHCCCEEECC
SPIRTGVSNFFDNLKDVYSFAFNVLRADPEKAANDFMRVAMNTGFGLFGLIDIADQAGLK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NNKTTLGDVMASWGWKSSNYFVMPFFGPSTVRDSTGLATSLVGPGPEKLVYHNTNEAIAF
CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCEEEECCCCEEEE
YGVYGVSTRAKYLGAENVLDTAAVDRYSYTRDLYMQMRAKQLGQPDPTQPVDNFNLDDLM
EEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
SGGDSSAPAAERKAAPAEASAPAAAIAASAAQ
CCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MRPAKLLAAASLLALAGCASHPTAAYDPYEPYNRAMFTVNDKADQWVLKPAAQGYQAVVP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECHHHCCCEEECC
SPIRTGVSNFFDNLKDVYSFAFNVLRADPEKAANDFMRVAMNTGFGLFGLIDIADQAGLK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NNKTTLGDVMASWGWKSSNYFVMPFFGPSTVRDSTGLATSLVGPGPEKLVYHNTNEAIAF
CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCEEEECCCCEEEE
YGVYGVSTRAKYLGAENVLDTAAVDRYSYTRDLYMQMRAKQLGQPDPTQPVDNFNLDDLM
EEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
SGGDSSAPAAERKAAPAEASAPAAAIAASAAQ
CCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]