| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34495897
Identifier: 34495897
GI number: 34495897
Start: 461485
End: 462243
Strand: Reverse
Name: 34495897
Synonym: CV_0442
Alternate gene names: NA
Gene position: 462243-461485 (Counterclockwise)
Preceding gene: 34495898
Following gene: 34495890
Centisome position: 9.73
GC content: 69.3
Gene sequence:
>759_bases ATGATCCGCGCCTTGTCCGGACTATGCGTCTGCCTGTGGCTCTGCCAGGCCGCCGCCCAGCCTCCCGCCGTCCGCCTGTG CCACGAGGATGCGCCGTCCTATCCCTGGCTGCTGGAAAACGGGCGCGGCCTGAGCCAGATCATGATGAGCATGGCGGCCG AACGGATCGGCGTCGAAATCCGCAGCCAGGCGCTGCCCTGGGTGCGCTGCATGGCCGAGGTCAAGGCAGGGCGGCTGGAC GGCCTGTACAAGATCAGCTTCTCGCCGGATAGGATGGAGCTGGGCGAGTTTCCGCTGAAGAACGGCCAGCCCGACGCCGC GCTGCGCATGCTGACCGACAGCTACCACCTCTACCGCGCCCAACACGGCCGCCTGGCCTGGGATGGCCGCCATGTCTCGG GCGCAGACAAGGGCATCGCCGCCCAGACCGGCTTTTCCGTCGTCGCCCAGCTGCAACAGCTGGGCCTGCGCGTGGACAGT ACCTCGCGCAACGCGGCGGTCATCCTGCACAAGGTGCTGCTGGGACGGGTGGACGGCGCCGCGCTGCAAAGCCAGGCGGC CGACGACGCCATCGCCGCCGAGCCGGCGCTGCAGAACCAGTTCGACAAGCTGGAACCGCCGCTGGCGATCAAGCCCTATT ACCTGATCTTCTCCCACGCGTTCTACCAGCGCCAGCCGGCGCTGGCCCGGCAGATCTGGGAAGCCGTCGCCGCCGTGCGC GCCTCGCCCGCCTACGCCGCCGCCCGTCCAGGCGAATGA
Upstream 100 bases:
>100_bases ATCCGGCATCCGCGCCGGCAATCAGCGAAGGCGGCCCTCGGGCCGCCTTTTTCCATCCCGCCTATACTGAGGCAACGCCA CCACGCCAAACGCCGCCTCG
Downstream 100 bases:
>100_bases GAAGCCGCTATGGCGCGGCGGCGGGCCGCCAGCCTTCGACGAAGCGGACCGCCTCGTCCAGATCGACCTGCCCGCCTATG GTTGCCATCTGCGCCATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MIRALSGLCVCLWLCQAAAQPPAVRLCHEDAPSYPWLLENGRGLSQIMMSMAAERIGVEIRSQALPWVRCMAEVKAGRLD GLYKISFSPDRMELGEFPLKNGQPDAALRMLTDSYHLYRAQHGRLAWDGRHVSGADKGIAAQTGFSVVAQLQQLGLRVDS TSRNAAVILHKVLLGRVDGAALQSQAADDAIAAEPALQNQFDKLEPPLAIKPYYLIFSHAFYQRQPALARQIWEAVAAVR ASPAYAAARPGE
Sequences:
>Translated_252_residues MIRALSGLCVCLWLCQAAAQPPAVRLCHEDAPSYPWLLENGRGLSQIMMSMAAERIGVEIRSQALPWVRCMAEVKAGRLD GLYKISFSPDRMELGEFPLKNGQPDAALRMLTDSYHLYRAQHGRLAWDGRHVSGADKGIAAQTGFSVVAQLQQLGLRVDS TSRNAAVILHKVLLGRVDGAALQSQAADDAIAAEPALQNQFDKLEPPLAIKPYYLIFSHAFYQRQPALARQIWEAVAAVR ASPAYAAARPGE >Mature_252_residues MIRALSGLCVCLWLCQAAAQPPAVRLCHEDAPSYPWLLENGRGLSQIMMSMAAERIGVEIRSQALPWVRCMAEVKAGRLD GLYKISFSPDRMELGEFPLKNGQPDAALRMLTDSYHLYRAQHGRLAWDGRHVSGADKGIAAQTGFSVVAQLQQLGLRVDS TSRNAAVILHKVLLGRVDGAALQSQAADDAIAAEPALQNQFDKLEPPLAIKPYYLIFSHAFYQRQPALARQIWEAVAAVR ASPAYAAARPGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27560; Mature: 27560
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRALSGLCVCLWLCQAAAQPPAVRLCHEDAPSYPWLLENGRGLSQIMMSMAAERIGVEI CCCHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH RSQALPWVRCMAEVKAGRLDGLYKISFSPDRMELGEFPLKNGQPDAALRMLTDSYHLYRA HHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QHGRLAWDGRHVSGADKGIAAQTGFSVVAQLQQLGLRVDSTSRNAAVILHKVLLGRVDGA CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCCH ALQSQAADDAIAAEPALQNQFDKLEPPLAIKPYYLIFSHAFYQRQPALARQIWEAVAAVR HHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ASPAYAAARPGE CCCCCCCCCCCC >Mature Secondary Structure MIRALSGLCVCLWLCQAAAQPPAVRLCHEDAPSYPWLLENGRGLSQIMMSMAAERIGVEI CCCHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH RSQALPWVRCMAEVKAGRLDGLYKISFSPDRMELGEFPLKNGQPDAALRMLTDSYHLYRA HHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QHGRLAWDGRHVSGADKGIAAQTGFSVVAQLQQLGLRVDSTSRNAAVILHKVLLGRVDGA CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCCH ALQSQAADDAIAAEPALQNQFDKLEPPLAIKPYYLIFSHAFYQRQPALARQIWEAVAAVR HHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ASPAYAAARPGE CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA