| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34495859
Identifier: 34495859
GI number: 34495859
Start: 420884
End: 421207
Strand: Reverse
Name: 34495859
Synonym: CV_0404
Alternate gene names: NA
Gene position: 421207-420884 (Counterclockwise)
Preceding gene: 34495860
Following gene: 34495858
Centisome position: 8.87
GC content: 47.22
Gene sequence:
>324_bases CTGGCACGCAAGTTCAAAGAAATAACTGGTATTTCCTATCTCTTGCAGTGCAAGTATTCGGCTTTCGCCAAGCACTTACA CCTATCGGTTATTCGTTCTGTTAAAGAGCAGTGCTGGCCGCTGCGTCGTCGCTGCGGAACCGTTTCGTTTCCGCTGTTTC GTTCGCTGCGTCAGCTGAGGAGACGAACTATACCTGCGCCCCCACCCTCGGTCAACAGGTTTTTTGAGAAAATGCGGAGA TTTTCAAGACGAACCCGCCAAGATCTTGTTTTGCAAAGATTTTTAATTTACGCTTTTTTAAGAAAAGCGCACATCTCTTG CTGA
Upstream 100 bases:
>100_bases GCAAGCACCCTGTTACCGTTCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTCAATCTGAGCCAGGATCAAACTCTTCA GTTCAATCTCTTAGCAATTT
Downstream 100 bases:
>100_bases GACAGGGCTTTTAGCATGCTTCGACCTCGTGGATTTTTTGCAAAACTAGGCAAAACCAGCTGAATTTTTCGTCAAATGCT CGAAAGAACAGAACTTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MARKFKEITGISYLLQCKYSAFAKHLHLSVIRSVKEQCWPLRRRCGTVSFPLFRSLRQLRRRTIPAPPPSVNRFFEKMRR FSRRTRQDLVLQRFLIYAFLRKAHISC
Sequences:
>Translated_107_residues MARKFKEITGISYLLQCKYSAFAKHLHLSVIRSVKEQCWPLRRRCGTVSFPLFRSLRQLRRRTIPAPPPSVNRFFEKMRR FSRRTRQDLVLQRFLIYAFLRKAHISC >Mature_106_residues ARKFKEITGISYLLQCKYSAFAKHLHLSVIRSVKEQCWPLRRRCGTVSFPLFRSLRQLRRRTIPAPPPSVNRFFEKMRRF SRRTRQDLVLQRFLIYAFLRKAHISC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12915; Mature: 12783
Theoretical pI: Translated: 12.23; Mature: 12.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKFKEITGISYLLQCKYSAFAKHLHLSVIRSVKEQCWPLRRRCGTVSFPLFRSLRQLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RRTIPAPPPSVNRFFEKMRRFSRRTRQDLVLQRFLIYAFLRKAHISC HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARKFKEITGISYLLQCKYSAFAKHLHLSVIRSVKEQCWPLRRRCGTVSFPLFRSLRQLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RRTIPAPPPSVNRFFEKMRRFSRRTRQDLVLQRFLIYAFLRKAHISC HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA