| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34495829
Identifier: 34495829
GI number: 34495829
Start: 390480
End: 391295
Strand: Reverse
Name: 34495829
Synonym: CV_0374
Alternate gene names: NA
Gene position: 391295-390480 (Counterclockwise)
Preceding gene: 34495831
Following gene: 34495828
Centisome position: 8.24
GC content: 68.38
Gene sequence:
>816_bases ATGCGCCGGTCCGCCATTCGACTGTTGCCCATGCTGTGGTCCGCCTGCTGCGCCGCGGCGCCGCAGACGGTGACCATCCT GACCGACAACGGCTATCCGCCTTACTCGTACGAGGCCGGCGGGCAGGCTCAAGGCATCTACAACGACATCCTGCGCGCCG CCTCCGACCGGCTGAGCGGCTACCGGATAGAACTGCACCCGGTGCCGTGGAAACGCGGCCTGGCGGAACTGGAAGCCGGA CGCGCGCTGGCGCTGTCCCCGCCCTATTACCGTCCCGGCGAACGCCCCTTCATGCGCCCCTACTCGGTGCCCATGCTGCG CGAGAAAGTGGTGGTCTACTGCCGGGCGGCGGTGATGAGGCTGCCCCGCCCGGTGTGGCCGAACGACTACCTGGGGCTGC GCTTCGGCAACAACGCCGGCTTCCGTCCCGGCGGCGGCGCCTTCTGGGCGCTGGTGGACCTGGGACGGATTTCGATGGAG GAGGCGCCGGACGTCCGCACCAACCTGCTGAAGCTGATCCGCGGCCACCTGGATTGCTACCAGAACGACAAGCTGGCGAT AGACATGGAGCTGGCGAAGCTGCAGCGGCTGGGCCTGTACCGCGAAGGCCAGCTGGCCGAGGCCGCGACGGTGTCGGAAG AACAGGGCTACGTCGGCTTCACCGACCGCGACGGCGGCCGCTTCCCGTACAAGCAGGACTTCATCCGCGAATTGAACCAG GCGCTGGCCGGCATGAAACGGGACGGCACCGTCGACCGCATCGTCGGGCACGCGCTGAACGCCGCGCGCAGCCAGCCGGC TTCGGCCAGTTTTTGA
Upstream 100 bases:
>100_bases CTCATGTCGCCCCCCTTCGTGTCCTCCGGGGTCAACGCAAAAGCCATGCCACCGGCTACACGCTATAACGATGGTATTCC CCTCATGGAGCGTTGCCGCG
Downstream 100 bases:
>100_bases CAGCCGGGAAAGCCCCGACATAGCATGTGCTGTCGCCCTACACGAAAGACTCAATGGAAAACCGCAAACTGGCGGTATTG ATAGACGCCGACAACGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRRSAIRLLPMLWSACCAAAPQTVTILTDNGYPPYSYEAGGQAQGIYNDILRAASDRLSGYRIELHPVPWKRGLAELEAG RALALSPPYYRPGERPFMRPYSVPMLREKVVVYCRAAVMRLPRPVWPNDYLGLRFGNNAGFRPGGGAFWALVDLGRISME EAPDVRTNLLKLIRGHLDCYQNDKLAIDMELAKLQRLGLYREGQLAEAATVSEEQGYVGFTDRDGGRFPYKQDFIRELNQ ALAGMKRDGTVDRIVGHALNAARSQPASASF
Sequences:
>Translated_271_residues MRRSAIRLLPMLWSACCAAAPQTVTILTDNGYPPYSYEAGGQAQGIYNDILRAASDRLSGYRIELHPVPWKRGLAELEAG RALALSPPYYRPGERPFMRPYSVPMLREKVVVYCRAAVMRLPRPVWPNDYLGLRFGNNAGFRPGGGAFWALVDLGRISME EAPDVRTNLLKLIRGHLDCYQNDKLAIDMELAKLQRLGLYREGQLAEAATVSEEQGYVGFTDRDGGRFPYKQDFIRELNQ ALAGMKRDGTVDRIVGHALNAARSQPASASF >Mature_271_residues MRRSAIRLLPMLWSACCAAAPQTVTILTDNGYPPYSYEAGGQAQGIYNDILRAASDRLSGYRIELHPVPWKRGLAELEAG RALALSPPYYRPGERPFMRPYSVPMLREKVVVYCRAAVMRLPRPVWPNDYLGLRFGNNAGFRPGGGAFWALVDLGRISME EAPDVRTNLLKLIRGHLDCYQNDKLAIDMELAKLQRLGLYREGQLAEAATVSEEQGYVGFTDRDGGRFPYKQDFIRELNQ ALAGMKRDGTVDRIVGHALNAARSQPASASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30238; Mature: 30238
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSAIRLLPMLWSACCAAAPQTVTILTDNGYPPYSYEAGGQAQGIYNDILRAASDRLSG CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC YRIELHPVPWKRGLAELEAGRALALSPPYYRPGERPFMRPYSVPMLREKVVVYCRAAVMR EEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LPRPVWPNDYLGLRFGNNAGFRPGGGAFWALVDLGRISMEEAPDVRTNLLKLIRGHLDCY CCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHC QNDKLAIDMELAKLQRLGLYREGQLAEAATVSEEQGYVGFTDRDGGRFPYKQDFIRELNQ CCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH ALAGMKRDGTVDRIVGHALNAARSQPASASF HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRSAIRLLPMLWSACCAAAPQTVTILTDNGYPPYSYEAGGQAQGIYNDILRAASDRLSG CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC YRIELHPVPWKRGLAELEAGRALALSPPYYRPGERPFMRPYSVPMLREKVVVYCRAAVMR EEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LPRPVWPNDYLGLRFGNNAGFRPGGGAFWALVDLGRISMEEAPDVRTNLLKLIRGHLDCY CCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHC QNDKLAIDMELAKLQRLGLYREGQLAEAATVSEEQGYVGFTDRDGGRFPYKQDFIRELNQ CCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH ALAGMKRDGTVDRIVGHALNAARSQPASASF HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA