| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864515
Identifier: 33864515
GI number: 33864515
Start: 2381752
End: 2383350
Strand: Direct
Name: 33864515
Synonym: PMT2251
Alternate gene names: NA
Gene position: 2381752-2383350 (Clockwise)
Preceding gene: 33864514
Following gene: 33864518
Centisome position: 98.79
GC content: 52.53
Gene sequence:
>1599_bases GTGCTGGCGTTCCCAAGCACATACAGCATTGGGATTACCAGCCTGGGATATCAAGTCATCTGGGCCACCCTCGCTAAACG TGAAGACATCGATGTAAGGCGGTTATTTACCGATCAAGGGGACATCCCCCATCGCACATGCGACCTGTTCGGACTCTCCC TGAGCTGGGAACTGGATGGTCCGGTATTACTGGATCTACTTGAGCAACAACGCATCCCGCTATGGAGTCATCAACGCGGA GAAAACAACCCGATTGTTTTTGGTGGTGGTCCTGTACTCACAGCTAACCCCGAACCCCTAGCTCCATTTTTCGATGTGGT TTTGTTGGGAGACGGGGAAGAACTTTTACCAGCCTTCATCGATAGGCTCCAACAAGTGAAACAGTTGCCGCGAACTGATC GCCTGCGAGCTCTGGCAAAGATTCCAGGTGTCTATGTACCAAGGTTCTATGAACCCATCTACGACGCTGACGACAGCCTG CTGACAGTAAAGCCCGTCGAATCCGACTTACCCCACTCAATCGCGAAGCAAACCTGGCGCGGCAACACCCTCACTCATTC CACAGTGATCACGCCAGATGCTGCCTGGCCAAACATCCATATGGTTGAGGTGGTCCGCAGCTGCCCAGAACTTTGCCGAT TCTGTCTTGCCAGCTATCTCACACTGCCCTTCCGCAGTCCATCCTTAGACGATGGACTCATCCCTGCCATTGAGAAAGGA CTCACCGCCACCAAGAGACTTGGACTACTAGGCGCTTCTGTTACCCAACACCCTCAATTTGGTGAGCTACTGCAATGGTT AGACAAAGATCGCTTCAACGACATCCACCTCAGCGTTAGCTCTGTACGGGCAGCCACAGTAAACTCAGAATTGACCAGGA TCCTGAACCGCCGCGGCAGTAAATCACTCACAATTGCCATCGAAAGCGGCAGCGAGCGCATTCGCGCAATGATCAATAAA AAGCTTGCTAAAGAAGAAATTTTTGCGGCTGCCAAATATGCGTTTGAAGGCGGCCTCCGTGGCCTGAAGCTCTACGGCAT GGTTGGACTGCCTACCGAAGAAGACTCCGATATAGACGACACGAGCAATCTGTTACTGAACCTCAAAAAAACAACCCCAG GCTTACGCCTCACTCTGGGAGTCAGCACCTTTGTCCCTAAGGCTCATACTCCCTTTCAATGGCACGGGATCAACCGTAAA GCGGAAAAACGACTCAAACAACTAGCAAAACAACTGAAACCAAAAGGCATTGAGGTGCGACCAGAAAGCTTCGGATGGAG CACGATCCAGGCTCTGCTGTCACGCAGTGACCGACGCCTCGCCCCTGTGATTGCATCTGTCCGGGGCTCACACAACAAAC TAGGCAGCTGGAAAAAGGCTTACAAAGCAGCACGCGAAGGGGATCTCAGTACAACGACTGAACAAGCCATACCACTGCCC CGCCCACCCGCCTGGGAAGAAGTGGTGCATGAATCATGGGAGCCATCACGAACACTGCCCTGGACCCATCTAGAAGGGCC CCTCAACCAAAAGCAACTCATCCAACATCATTATCAAGCCCTAAACGAGCATGCTGGAGTGCCTGCTGGGGAAGAATGA
Upstream 100 bases:
>100_bases AGGCTCTTCAGGATGAACTGATGTTGCCAAGGTTGACCTCCTGAACAAGGAAACGCTCCTATTCACCCCCGCCGTTCCCG AACCTGGAGCGCTCCGAACC
Downstream 100 bases:
>100_bases TGCAACGCAATCCAGCCAAAAGAATCCAGCCGGCAATGTTGAGCCGACTGTCAAAGAAAGGCATATCAGTAGCGTGCATC ACCACCAGGATCAAACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MLAFPSTYSIGITSLGYQVIWATLAKREDIDVRRLFTDQGDIPHRTCDLFGLSLSWELDGPVLLDLLEQQRIPLWSHQRG ENNPIVFGGGPVLTANPEPLAPFFDVVLLGDGEELLPAFIDRLQQVKQLPRTDRLRALAKIPGVYVPRFYEPIYDADDSL LTVKPVESDLPHSIAKQTWRGNTLTHSTVITPDAAWPNIHMVEVVRSCPELCRFCLASYLTLPFRSPSLDDGLIPAIEKG LTATKRLGLLGASVTQHPQFGELLQWLDKDRFNDIHLSVSSVRAATVNSELTRILNRRGSKSLTIAIESGSERIRAMINK KLAKEEIFAAAKYAFEGGLRGLKLYGMVGLPTEEDSDIDDTSNLLLNLKKTTPGLRLTLGVSTFVPKAHTPFQWHGINRK AEKRLKQLAKQLKPKGIEVRPESFGWSTIQALLSRSDRRLAPVIASVRGSHNKLGSWKKAYKAAREGDLSTTTEQAIPLP RPPAWEEVVHESWEPSRTLPWTHLEGPLNQKQLIQHHYQALNEHAGVPAGEE
Sequences:
>Translated_532_residues MLAFPSTYSIGITSLGYQVIWATLAKREDIDVRRLFTDQGDIPHRTCDLFGLSLSWELDGPVLLDLLEQQRIPLWSHQRG ENNPIVFGGGPVLTANPEPLAPFFDVVLLGDGEELLPAFIDRLQQVKQLPRTDRLRALAKIPGVYVPRFYEPIYDADDSL LTVKPVESDLPHSIAKQTWRGNTLTHSTVITPDAAWPNIHMVEVVRSCPELCRFCLASYLTLPFRSPSLDDGLIPAIEKG LTATKRLGLLGASVTQHPQFGELLQWLDKDRFNDIHLSVSSVRAATVNSELTRILNRRGSKSLTIAIESGSERIRAMINK KLAKEEIFAAAKYAFEGGLRGLKLYGMVGLPTEEDSDIDDTSNLLLNLKKTTPGLRLTLGVSTFVPKAHTPFQWHGINRK AEKRLKQLAKQLKPKGIEVRPESFGWSTIQALLSRSDRRLAPVIASVRGSHNKLGSWKKAYKAAREGDLSTTTEQAIPLP RPPAWEEVVHESWEPSRTLPWTHLEGPLNQKQLIQHHYQALNEHAGVPAGEE >Mature_532_residues MLAFPSTYSIGITSLGYQVIWATLAKREDIDVRRLFTDQGDIPHRTCDLFGLSLSWELDGPVLLDLLEQQRIPLWSHQRG ENNPIVFGGGPVLTANPEPLAPFFDVVLLGDGEELLPAFIDRLQQVKQLPRTDRLRALAKIPGVYVPRFYEPIYDADDSL LTVKPVESDLPHSIAKQTWRGNTLTHSTVITPDAAWPNIHMVEVVRSCPELCRFCLASYLTLPFRSPSLDDGLIPAIEKG LTATKRLGLLGASVTQHPQFGELLQWLDKDRFNDIHLSVSSVRAATVNSELTRILNRRGSKSLTIAIESGSERIRAMINK KLAKEEIFAAAKYAFEGGLRGLKLYGMVGLPTEEDSDIDDTSNLLLNLKKTTPGLRLTLGVSTFVPKAHTPFQWHGINRK AEKRLKQLAKQLKPKGIEVRPESFGWSTIQALLSRSDRRLAPVIASVRGSHNKLGSWKKAYKAAREGDLSTTTEQAIPLP RPPAWEEVVHESWEPSRTLPWTHLEGPLNQKQLIQHHYQALNEHAGVPAGEE
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 59402; Mature: 59402
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFPSTYSIGITSLGYQVIWATLAKREDIDVRRLFTDQGDIPHRTCDLFGLSLSWELDG CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHEEEEEEEEECCC PVLLDLLEQQRIPLWSHQRGENNPIVFGGGPVLTANPEPLAPFFDVVLLGDGEELLPAFI HHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEECCCHHHHHHHH DRLQQVKQLPRTDRLRALAKIPGVYVPRFYEPIYDADDSLLTVKPVESDLPHSIAKQTWR HHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCC GNTLTHSTVITPDAAWPNIHMVEVVRSCPELCRFCLASYLTLPFRSPSLDDGLIPAIEKG CCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC LTATKRLGLLGASVTQHPQFGELLQWLDKDRFNDIHLSVSSVRAATVNSELTRILNRRGS CHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC KSLTIAIESGSERIRAMINKKLAKEEIFAAAKYAFEGGLRGLKLYGMVGLPTEEDSDIDD CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC TSNLLLNLKKTTPGLRLTLGVSTFVPKAHTPFQWHGINRKAEKRLKQLAKQLKPKGIEVR CCHHEEEEECCCCCEEEEEEHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEC PESFGWSTIQALLSRSDRRLAPVIASVRGSHNKLGSWKKAYKAAREGDLSTTTEQAIPLP CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCCHHHCCCCC RPPAWEEVVHESWEPSRTLPWTHLEGPLNQKQLIQHHYQALNEHAGVPAGEE CCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLAFPSTYSIGITSLGYQVIWATLAKREDIDVRRLFTDQGDIPHRTCDLFGLSLSWELDG CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHEEEEEEEEECCC PVLLDLLEQQRIPLWSHQRGENNPIVFGGGPVLTANPEPLAPFFDVVLLGDGEELLPAFI HHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEECCCHHHHHHHH DRLQQVKQLPRTDRLRALAKIPGVYVPRFYEPIYDADDSLLTVKPVESDLPHSIAKQTWR HHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCC GNTLTHSTVITPDAAWPNIHMVEVVRSCPELCRFCLASYLTLPFRSPSLDDGLIPAIEKG CCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC LTATKRLGLLGASVTQHPQFGELLQWLDKDRFNDIHLSVSSVRAATVNSELTRILNRRGS CHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC KSLTIAIESGSERIRAMINKKLAKEEIFAAAKYAFEGGLRGLKLYGMVGLPTEEDSDIDD CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC TSNLLLNLKKTTPGLRLTLGVSTFVPKAHTPFQWHGINRKAEKRLKQLAKQLKPKGIEVR CCHHEEEEECCCCCEEEEEEHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEC PESFGWSTIQALLSRSDRRLAPVIASVRGSHNKLGSWKKAYKAAREGDLSTTTEQAIPLP CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCCHHHCCCCC RPPAWEEVVHESWEPSRTLPWTHLEGPLNQKQLIQHHYQALNEHAGVPAGEE CCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]