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The map label for this gene is ycgR [H]

Identifier: 33864471

GI number: 33864471

Start: 2333219

End: 2334175

Strand: Reverse

Name: ycgR [H]

Synonym: PMT2207

Alternate gene names: 33864471

Gene position: 2334175-2333219 (Counterclockwise)

Preceding gene: 33864473

Following gene: 33864470

Centisome position: 96.82

GC content: 56.95

Gene sequence:

>957_bases
ATGGATAGGCTCGCCACTGCCTGGGCGATATTTCAGGGCCTTCTGCTTGAAGCGATTCCCTTCCTGTTGCTGGGTGTCAC
CATTGCTGGCCTGGCCCGCTGGCTTGTACCCCAGAGTGCCTGGATCGGACGTCTCCCCCGGCATCCACTGCTAGCGCCGA
TCACGGGTGCCTTAATGGGTTTTGCCCTACCTGCTTGTGAATGTGGCAATGTTCCTGTCGCCCGCCGCTTGCTGGCCAGC
GGTGCTCCTTTGGGCACAGCCTTTGGCTTTTTGTTTGCAGCGCCAGTCCTGAATCCGATTGTTCTCGCCAGCACCTGGGC
CGCTTTCCCTGATCAGTCTTGGTTGCTGATTGCTAGACCACTGGGAGCCTTTCTCATCGCTTTGTTACTCAGTGCTCTTT
TGGTGCAGCTACCAGAAGCGCAATTGATTGAATCGTCCCTACTGGCAGAACGGCGTCTTAGCCAGCCCTTGAGCAGCATC
GGCCTATTAGAAAGAGGCGCTGGGCTGATCGGAGCCGCGCTACCCGATCCACAACCAACGAGAATCAAGCGACCTCAACT
CAGTGAGGTGCTGGAACAAAGCAGCCGGGAATTTCTTGACCTGCTTGCTCTACTCGTACTCGGTTGTGTGATCGCCGCCC
TTGTGCAGAGCTGGCTGCCACGCAGTTGGCTATTGGCGGTAGGCAGCGCGCCGACACTCTCGATTGTGGCGTTAATGCTG
CTGGCGATTGTGGTCTCGGTGTGCTCAAGCGTGGATGCTTTTCTGGCCCTTGGCTTTGCTGCCCAGGTGACACCAGGAGC
CCTGCTGGCGTTCCTGTTATTGGGTCCGGTTGTGGATCTGAAACTTGCAGGTTTGTTCACGGTGTTGCTCAGGCCAAAAG
CGATTGGCATCACGGCAATCGTGGCCTGTTTAGGCGTGCTGCTCATCGGCCAGTGGGTCAATTTATGGCAACTTTGA

Upstream 100 bases:

>100_bases
CACTGGGCACAAGTGTTCAATCTGATCCATTCAATATCATGAAAAATTCTGCAAAAGAATTCCATTGCTGCAGAATCAGC
CACATGCACAGTTGAGCTAG

Downstream 100 bases:

>100_bases
ACAGGAGAAAACGATGATGCGTGCCCTGCTTCTGCAGCTGTGGGGATGGATGGTGGTCTGGAGTGTTCATTCAGGTCGCC
TCGACCTCCTTCTCGCTGGT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQSAWIGRLPRHPLLAPITGALMGFALPACECGNVPVARRLLAS
GAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARPLGAFLIALLLSALLVQLPEAQLIESSLLAERRLSQPLSSI
GLLERGAGLIGAALPDPQPTRIKRPQLSEVLEQSSREFLDLLALLVLGCVIAALVQSWLPRSWLLAVGSAPTLSIVALML
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAIVACLGVLLIGQWVNLWQL

Sequences:

>Translated_318_residues
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQSAWIGRLPRHPLLAPITGALMGFALPACECGNVPVARRLLAS
GAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARPLGAFLIALLLSALLVQLPEAQLIESSLLAERRLSQPLSSI
GLLERGAGLIGAALPDPQPTRIKRPQLSEVLEQSSREFLDLLALLVLGCVIAALVQSWLPRSWLLAVGSAPTLSIVALML
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAIVACLGVLLIGQWVNLWQL
>Mature_318_residues
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQSAWIGRLPRHPLLAPITGALMGFALPACECGNVPVARRLLAS
GAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARPLGAFLIALLLSALLVQLPEAQLIESSLLAERRLSQPLSSI
GLLERGAGLIGAALPDPQPTRIKRPQLSEVLEQSSREFLDLLALLVLGCVIAALVQSWLPRSWLLAVGSAPTLSIVALML
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAIVACLGVLLIGQWVNLWQL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 33544; Mature: 33544

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQSAWIGRLPRHPLLAPITGALMG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
FALPACECGNVPVARRLLASGAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARP
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
LGAFLIALLLSALLVQLPEAQLIESSLLAERRLSQPLSSIGLLERGAGLIGAALPDPQPT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCCCCC
RIKRPQLSEVLEQSSREFLDLLALLVLGCVIAALVQSWLPRSWLLAVGSAPTLSIVALML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHH
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VACLGVLLIGQWVNLWQL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQSAWIGRLPRHPLLAPITGALMG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
FALPACECGNVPVARRLLASGAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARP
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
LGAFLIALLLSALLVQLPEAQLIESSLLAERRLSQPLSSIGLLERGAGLIGAALPDPQPT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCCCCC
RIKRPQLSEVLEQSSREFLDLLALLVLGCVIAALVQSWLPRSWLLAVGSAPTLSIVALML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHH
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VACLGVLLIGQWVNLWQL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]