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The map label for this gene is 33864462

Identifier: 33864462

GI number: 33864462

Start: 2323719

End: 2324384

Strand: Direct

Name: 33864462

Synonym: PMT2198

Alternate gene names: NA

Gene position: 2323719-2324384 (Clockwise)

Preceding gene: 33864461

Following gene: 33864463

Centisome position: 96.38

GC content: 53.15

Gene sequence:

>666_bases
TTGATGGAGGAGATCCCTTCCCTTAGCCCACAAAACCTCGACCAATTACGACAAGCCCTTGCTGATGGCAAGCGTTGTTT
TCCAGGCCTTCACCTCATTCAAGTCGATGGTCTTGATCTATCAAGCTGCGAACTCACCGACAGCTGTTTCAAGGAAGCCC
GCTTTGGTCATGCCCAGCTAAGTAATGCCAACGTCCAGGGCTGCTGTTTTCAAGAAGCCTTGCTATGGGGGGCAGATCTT
TCCAATCTTCAAGCTCAGCAATCGTTTTGGCACGAAGCTGACCTCTCCGGATCCCGTATGCAAAAAGCAGACTTCAGCGA
GGCTGTCATGCATCGCTGTTGCTTAAGAGGCGTGATTGCTGCCAGCAGCAGATGGCATCACACCCGGCTAGTCGAGGCAG
ATTTCCGTTCAGGACTCGATCAACTCACTGACCTAGGCAAAGCAGATTTCAACAACGCAGACCTTAGTTATGCCCTGCTA
CAGAGAGCCAATCTGCACGGAGCCAACCTGCTTGGCTGCTGCCTCTACGGCACATCCTTTAGCGAAGCCGATCTACGCAA
AGCGGACCTACGTGGATGCGATCTGAGAAACAGCAAGCTAGAAGGAGCCCAGCTGGAGGGCGCCCGCCTTGAAGGAGCCC
TGCTACCCAAAGGCCTAAAACCTTAA

Upstream 100 bases:

>100_bases
ACGAGGTGATGGACAAGGCTGTCTTCAAACTGATTAGCCAGGCGCAAAAACTGATCATGACCGCCCGCCGCCAACAGCTC
GACGAACTCTCCTCCATCAT

Downstream 100 bases:

>100_bases
AACTCAAAACCAATCAATCCATTGCTAAGCCCATGGCAAGGCGCTGATGCTGATCTTCATTAGCCCTGCCAATGCAGATC
TTTCAAAACCGCTACTGAAA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MMEEIPSLSPQNLDQLRQALADGKRCFPGLHLIQVDGLDLSSCELTDSCFKEARFGHAQLSNANVQGCCFQEALLWGADL
SNLQAQQSFWHEADLSGSRMQKADFSEAVMHRCCLRGVIAASSRWHHTRLVEADFRSGLDQLTDLGKADFNNADLSYALL
QRANLHGANLLGCCLYGTSFSEADLRKADLRGCDLRNSKLEGAQLEGARLEGALLPKGLKP

Sequences:

>Translated_221_residues
MMEEIPSLSPQNLDQLRQALADGKRCFPGLHLIQVDGLDLSSCELTDSCFKEARFGHAQLSNANVQGCCFQEALLWGADL
SNLQAQQSFWHEADLSGSRMQKADFSEAVMHRCCLRGVIAASSRWHHTRLVEADFRSGLDQLTDLGKADFNNADLSYALL
QRANLHGANLLGCCLYGTSFSEADLRKADLRGCDLRNSKLEGAQLEGARLEGALLPKGLKP
>Mature_221_residues
MMEEIPSLSPQNLDQLRQALADGKRCFPGLHLIQVDGLDLSSCELTDSCFKEARFGHAQLSNANVQGCCFQEALLWGADL
SNLQAQQSFWHEADLSGSRMQKADFSEAVMHRCCLRGVIAASSRWHHTRLVEADFRSGLDQLTDLGKADFNNADLSYALL
QRANLHGANLLGCCLYGTSFSEADLRKADLRGCDLRNSKLEGAQLEGARLEGALLPKGLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 24267; Mature: 24267

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEEIPSLSPQNLDQLRQALADGKRCFPGLHLIQVDGLDLSSCELTDSCFKEARFGHAQL
CCCCCCCCCCCCHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
SNANVQGCCFQEALLWGADLSNLQAQQSFWHEADLSGSRMQKADFSEAVMHRCCLRGVIA
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHH
ASSRWHHTRLVEADFRSGLDQLTDLGKADFNNADLSYALLQRANLHGANLLGCCLYGTSF
HCCCCCHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCC
SEADLRKADLRGCDLRNSKLEGAQLEGARLEGALLPKGLKP
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMEEIPSLSPQNLDQLRQALADGKRCFPGLHLIQVDGLDLSSCELTDSCFKEARFGHAQL
CCCCCCCCCCCCHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
SNANVQGCCFQEALLWGADLSNLQAQQSFWHEADLSGSRMQKADFSEAVMHRCCLRGVIA
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHH
ASSRWHHTRLVEADFRSGLDQLTDLGKADFNNADLSYALLQRANLHGANLLGCCLYGTSF
HCCCCCHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCC
SEADLRKADLRGCDLRNSKLEGAQLEGARLEGALLPKGLKP
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA